Analysis of interatomic Contacts of Structural Units in PDB entry:
1TJF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TJF entry

There are 2 chains in PDB entry 1TJF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 43PRO 227
B
 SER 42PRO 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 1TJF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 74Right-handed alpha
Helix 2
2
A
74 101Right-handed alpha
Helix 3
3
A
105 129Right-handed alpha
Helix 4
4
A
135 144Right-handed alpha
Helix 5
5
A
145 154Right-handed 310
Helix 6
6
A
157 181Right-handed alpha
Helix 7
7
A
184 209Right-handed alpha
Helix 8
8
B
48 74Right-handed alpha
Helix 9
9
B
74 100Right-handed alpha
Helix 10
10
B
105 129Right-handed alpha
Helix 11
11
B
135 144Right-handed alpha
Helix 12
12
B
145 154Right-handed 310
Helix 13
13
B
157 181Right-handed alpha
Helix 14
14
B
184 209Right-handed alpha
Helix 15
15
B
221 225Right-handed 310
Back to top of page
There are no sheets in PDB entry 1TJF
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il