Analysis of interatomic Contacts of Structural Units in PDB entry:
1TJT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TJT entry

There is 1 chain in PDB entry 1TJT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 42GLY 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1TJT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 60Right-handed alpha
Helix 2
2
A
61 63Right-handed 310
Helix 3
3
A
76 88Right-handed alpha
Helix 4
4
A
99 116Right-handed alpha
Helix 5
5
A
125 131Right-handed alpha
Helix 6
6
A
133 150Right-handed alpha
Helix 7
7
A
160 173Right-handed alpha
Helix 8
8
A
184 188Right-handed 310
Helix 9
9
A
190 201Right-handed alpha
Helix 10
10
A
206 210Right-handed 310
Helix 11
11
A
214 230Right-handed alpha
Helix 12
12
A
237 244Right-handed alpha
Helix 13
13
A
248 265Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1TJT.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
A
158 159anti-parallel
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