Analysis of interatomic Contacts of Structural Units in PDB entry:
1TJW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TJW entry

There are 4 chains in PDB entry 1TJW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 19GLN 467
B
 ASP 20GLN 467
C
 ASP 20ALA 468
D
 THR 19GLN 467
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 1TJW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 28Right-handed alpha
Helix 2
2
A
29 34Right-handed alpha
Helix 3
3
A
36 54Right-handed alpha
Helix 4
4
A
58 78Right-handed alpha
Helix 5
5
A
89 103Right-handed alpha
Helix 6
6
A
104 109Right-handed 310
Helix 7
7
A
114 152Right-handed alpha
Helix 8
8
A
171 197Right-handed alpha
Helix 9
9
A
214 223Right-handed alpha
Helix 10
10
A
230 237Right-handed alpha
Helix 11
11
A
238 266Right-handed alpha
Helix 12
12
A
276 280Right-handed 310
Helix 13
13
A
292 317Right-handed alpha
Helix 14
14
A
324 328Right-handed 310
Helix 15
15
A
329 355Right-handed alpha
Helix 16
16
A
358 365Right-handed alpha
Helix 17
17
A
367 370Right-handed 310
Helix 18
18
A
371 381Right-handed alpha
Helix 19
19
A
385 403Right-handed alpha
Helix 20
20
A
406 410Right-handed 310
Helix 21
21
A
411 419Right-handed alpha
Helix 22
22
A
423 430Right-handed 310
Helix 23
23
A
431 437Right-handed alpha
Helix 24
24
A
446 466Right-handed alpha
Helix 25
25
B
20 28Right-handed alpha
Helix 26
26
B
29 34Right-handed alpha
Helix 27
27
B
36 54Right-handed alpha
Helix 28
28
B
58 78Right-handed alpha
Helix 29
29
B
89 103Right-handed alpha
Helix 30
30
B
104 109Right-handed 310
Helix 31
31
B
114 152Right-handed alpha
Helix 32
32
B
171 197Right-handed alpha
Helix 33
33
B
214 223Right-handed alpha
Helix 34
34
B
230 237Right-handed alpha
Helix 35
35
B
238 266Right-handed alpha
Helix 36
36
B
276 280Right-handed 310
Helix 37
37
B
292 317Right-handed alpha
Helix 38
38
B
324 328Right-handed 310
Helix 39
39
B
329 355Right-handed alpha
Helix 40
40
B
358 365Right-handed alpha
Helix 41
41
B
367 370Right-handed 310
Helix 42
42
B
371 382Right-handed alpha
Helix 43
43
B
385 403Right-handed alpha
Helix 44
44
B
406 410Right-handed 310
Helix 45
45
B
411 419Right-handed alpha
Helix 46
46
B
423 430Right-handed 310
Helix 47
47
B
431 437Right-handed alpha
Helix 48
48
B
446 466Right-handed alpha
Helix 49
49
C
20 28Right-handed alpha
Helix 50
50
C
29 34Right-handed alpha
Helix 51
51
C
36 54Right-handed alpha
Helix 52
52
C
58 78Right-handed alpha
Helix 53
53
C
89 103Right-handed alpha
Helix 54
54
C
104 109Right-handed 310
Helix 55
55
C
114 152Right-handed alpha
Helix 56
56
C
171 197Right-handed alpha
Helix 57
57
C
214 223Right-handed alpha
Helix 58
58
C
230 237Right-handed alpha
Helix 59
59
C
238 266Right-handed alpha
Helix 60
60
C
276 280Right-handed 310
Helix 61
61
C
292 317Right-handed alpha
Helix 62
62
C
324 328Right-handed 310
Helix 63
63
C
329 355Right-handed alpha
Helix 64
64
C
358 365Right-handed alpha
Helix 65
65
C
367 370Right-handed 310
Helix 66
66
C
371 381Right-handed alpha
Helix 67
67
C
385 404Right-handed alpha
Helix 68
68
C
406 410Right-handed 310
Helix 69
69
C
411 419Right-handed alpha
Helix 70
70
C
423 430Right-handed 310
Helix 71
71
C
431 437Right-handed alpha
Helix 72
72
C
446 467Right-handed alpha
Helix 73
73
D
20 28Right-handed alpha
Helix 74
74
D
29 34Right-handed alpha
Helix 75
75
D
36 54Right-handed alpha
Helix 76
76
D
58 78Right-handed alpha
Helix 77
77
D
89 103Right-handed alpha
Helix 78
78
D
104 111Right-handed 310
Helix 79
79
D
114 152Right-handed alpha
Helix 80
80
D
171 197Right-handed alpha
Helix 81
81
D
214 223Right-handed alpha
Helix 82
82
D
230 237Right-handed alpha
Helix 83
83
D
238 266Right-handed alpha
Helix 84
84
D
276 280Right-handed 310
Helix 85
85
D
292 317Right-handed alpha
Helix 86
86
D
324 328Right-handed 310
Helix 87
87
D
329 355Right-handed alpha
Helix 88
88
D
358 365Right-handed alpha
Helix 89
89
D
367 370Right-handed 310
Helix 90
90
D
371 381Right-handed alpha
Helix 91
91
D
385 404Right-handed alpha
Helix 92
92
D
406 410Right-handed 310
Helix 93
93
D
411 417Right-handed alpha
Helix 94
94
D
423 430Right-handed 310
Helix 95
95
D
431 437Right-handed alpha
Helix 96
96
D
446 467Right-handed alpha
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There are 15 sheets in PDB entry 1TJW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 161first strand
Strand 2
A
164 170anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
226 227parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 274first strand
Strand 2
A
356 357anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 161first strand
Strand 2
B
164 170anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 199first strand
Strand 2
B
226 227parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
273 274first strand
Strand 2
B
356 357anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
281 283first strand
Strand 2
B
286 291anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
156 161first strand
Strand 2
C
164 170anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
198 199first strand
Strand 2
C
226 227parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
273 274first strand
Strand 2
C
356 357anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
281 282first strand
Strand 2
C
290 291anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
156 161first strand
Strand 2
D
164 170anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
198 199first strand
Strand 2
D
226 227parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
273 274first strand
Strand 2
D
356 357anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
281 283first strand
Strand 2
D
286 291anti-parallel
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