Analysis of interatomic Contacts of Structural Units in PDB entry:
1TN8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TN8 entry

There are 3 chains in PDB entry 1TN8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 55VAL 377
B
 PRO 517PHE 923
C
 GLY 2005SER 2009
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 1TN8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 73Right-handed 310
Helix 2
2
A
93 110Right-handed alpha
Helix 3
3
A
113 127Right-handed alpha
Helix 4
4
A
130 144Right-handed alpha
Helix 5
5
A
147 162Right-handed alpha
Helix 6
6
A
165 180Right-handed alpha
Helix 7
7
A
184 196Right-handed alpha
Helix 8
8
A
199 214Right-handed alpha
Helix 9
9
A
218 230Right-handed alpha
Helix 10
10
A
233 247Right-handed alpha
Helix 11
11
A
252 270Right-handed alpha
Helix 12
12
A
273 285Right-handed alpha
Helix 13
13
A
288 291Right-handed 310
Helix 14
14
A
292 301Right-handed alpha
Helix 15
15
A
308 325Right-handed alpha
Helix 16
16
A
331 347Right-handed alpha
Helix 17
17
A
349 351Right-handed 310
Helix 18
18
A
352 368Right-handed alpha
Helix 19
19
B
523 534Right-handed 310
Helix 20
20
B
542 560Right-handed alpha
Helix 21
21
B
560 566Right-handed alpha
Helix 22
22
B
574 586Right-handed alpha
Helix 23
23
B
590 597Right-handed 310
Helix 24
24
B
599 614Right-handed alpha
Helix 25
25
B
619 634Right-handed alpha
Helix 26
26
B
649 664Right-handed alpha
Helix 27
27
B
665 672Right-handed alpha
Helix 28
28
B
673 685Right-handed alpha
Helix 29
29
B
700 714Right-handed alpha
Helix 30
30
B
724 732Right-handed alpha
Helix 31
31
B
748 762Right-handed alpha
Helix 32
32
B
764 768Right-handed 310
Helix 33
33
B
769 779Right-handed alpha
Helix 34
34
B
799 804Right-handed alpha
Helix 35
35
B
806 817Right-handed alpha
Helix 36
36
B
831 843Right-handed alpha
Helix 37
37
B
859 874Right-handed alpha
Helix 38
38
B
889 893Right-handed 310
Helix 39
39
B
904 916Right-handed alpha
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There are 2 sheets in PDB entry 1TN8. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
B
588 589parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
875 878first strand
Strand 2
B
881 884anti-parallel
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