Analysis of interatomic Contacts of Structural Units in PDB entry:
1TQH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TQH entry

There is 1 chain in PDB entry 1TQH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 6TRP 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1TQH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 42Right-handed alpha
Helix 2
2
A
57 62Right-handed alpha
Helix 3
3
A
65 83Right-handed alpha
Helix 4
4
A
94 105Right-handed alpha
Helix 5
5
A
123 143Right-handed alpha
Helix 6
6
A
145 157Right-handed alpha
Helix 7
7
A
163 177Right-handed alpha
Helix 8
8
A
178 181Right-handed 310
Helix 9
9
A
199 208Right-handed alpha
Helix 10
10
A
224 228Right-handed 310
Helix 11
11
A
230 245Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1TQH.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
45 48anti-parallel
Strand 3
A
18 22parallel
Strand 4
A
88 93parallel
Strand 5
A
112 115parallel
Strand 6
A
185 190parallel
Strand 7
A
213 218parallel
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