Analysis of interatomic Contacts of Structural Units in PDB entry:
1TRR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TRR entry

There are 12 chains in PDB entry 1TRR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 A 2 T 17
F
 A 2 T 17
I
 A 2 T 17
L
 A 2 T 17
A
 ALA 2LYS 106
B
 ALA 2LYS 106
D
 ALA 2LYS 106
E
 ALA 2LYS 106
G
 ALA 2LYS 106
H
 ALA 2LYS 106
J
 ALA 2LYS 106
K
 ALA 2LYS 106
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 1TRR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA
A
12 31Right-handed alpha
Helix 2
BA
A
35 42Right-handed alpha
Helix 3
CA
A
46 64Right-handed alpha
Helix 4
A
A
68 74Right-handed alpha
Helix 5
EA
A
79 91Right-handed alpha
Helix 6
FA
A
94 105Right-handed alpha
Helix 7
AB
B
12 31Right-handed alpha
Helix 8
BB
B
35 42Right-handed alpha
Helix 9
CB
B
46 64Right-handed alpha
Helix 10
DB
B
68 74Right-handed alpha
Helix 11
EB
B
79 91Right-handed alpha
Helix 12
FB
B
94 105Right-handed alpha
Helix 13
AD
D
12 31Right-handed alpha
Helix 14
BD
D
35 42Right-handed alpha
Helix 15
CD
D
46 64Right-handed alpha
Helix 16
DD
D
68 74Right-handed alpha
Helix 17
ED
D
79 91Right-handed alpha
Helix 18
FD
D
94 105Right-handed alpha
Helix 19
AE
E
12 31Right-handed alpha
Helix 20
BE
E
35 42Right-handed alpha
Helix 21
CE
E
46 64Right-handed alpha
Helix 22
DE
E
68 74Right-handed alpha
Helix 23
EE
E
79 91Right-handed alpha
Helix 24
FE
E
94 105Right-handed alpha
Helix 25
AG
G
12 31Right-handed alpha
Helix 26
BG
G
35 42Right-handed alpha
Helix 27
CG
G
46 64Right-handed alpha
Helix 28
G
G
68 74Right-handed alpha
Helix 29
EG
G
79 91Right-handed alpha
Helix 30
FG
G
94 105Right-handed alpha
Helix 31
AH
H
12 31Right-handed alpha
Helix 32
BH
H
35 42Right-handed alpha
Helix 33
CH
H
46 64Right-handed alpha
Helix 34
DH
H
68 74Right-handed alpha
Helix 35
EH
H
79 91Right-handed alpha
Helix 36
FH
H
94 105Right-handed alpha
Helix 37
AJ
J
12 31Right-handed alpha
Helix 38
BJ
J
35 42Right-handed alpha
Helix 39
CJ
J
46 64Right-handed alpha
Helix 40
DJ
J
68 74Right-handed alpha
Helix 41
EJ
J
79 91Right-handed alpha
Helix 42
FJ
J
94 105Right-handed alpha
Helix 43
AK
K
12 31Right-handed alpha
Helix 44
BK
K
35 42Right-handed alpha
Helix 45
CK
K
46 64Right-handed alpha
Helix 46
DK
K
68 74Right-handed alpha
Helix 47
EK
K
79 91Right-handed alpha
Helix 48
FK
K
94 105Right-handed alpha
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There are no sheets in PDB entry 1TRR
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