Analysis of interatomic Contacts of Structural Units in PDB entry:
1TU7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TU7 entry

There are 2 chains in PDB entry 1TU7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 208
B
 MET 1GLN 208
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1TU7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 13Right-handed 310
Helix 2
2
A
14 24Right-handed alpha
Helix 3
3
A
34 38Right-handed 310
Helix 4
4
A
41 45Right-handed 310
Helix 5
5
A
62 74Right-handed alpha
Helix 6
6
A
80 108Right-handed alpha
Helix 7
7
A
108 120Right-handed alpha
Helix 8
8
A
120 133Right-handed alpha
Helix 9
9
A
134 139Right-handed 310
Helix 10
10
A
148 165Right-handed alpha
Helix 11
11
A
172 184Right-handed alpha
Helix 12
12
A
185 198Right-handed alpha
Helix 13
13
B
14 24Right-handed alpha
Helix 14
14
B
34 36Right-handed 310
Helix 15
15
B
37 42Right-handed alpha
Helix 16
16
B
43 45Right-handed 310
Helix 17
17
B
62 74Right-handed alpha
Helix 18
18
B
80 108Right-handed alpha
Helix 19
19
B
108 120Right-handed alpha
Helix 20
20
B
120 133Right-handed alpha
Helix 21
21
B
134 139Right-handed 310
Helix 22
22
B
148 165Right-handed alpha
Helix 23
23
B
172 184Right-handed alpha
Helix 24
24
B
185 198Right-handed alpha
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There are 2 sheets in PDB entry 1TU7. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 33first strand
Strand 2
A
3 8parallel
Strand 3
A
52 55anti-parallel
Strand 4
A
58 61anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 33first strand
Strand 2
B
3 8parallel
Strand 3
B
52 55anti-parallel
Strand 4
B
58 61anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il