Analysis of interatomic Contacts of Structural Units in PDB entry:
1TVE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TVE entry

There are 2 chains in PDB entry 1TVE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 359
B
 SER 2LEU 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 1TVE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 27Right-handed alpha
Helix 2
2
A
58 66Right-handed alpha
Helix 3
3
A
72 82Right-handed alpha
Helix 4
4
A
95 100Right-handed alpha
Helix 5
5
A
101 108Right-handed alpha
Helix 6
6
A
117 122Right-handed alpha
Helix 7
7
A
142 146Right-handed 310
Helix 8
8
A
151 162Right-handed alpha
Helix 9
9
A
174 185Right-handed alpha
Helix 10
10
A
193 204Right-handed alpha
Helix 11
11
A
211 216Right-handed alpha
Helix 12
12
A
217 232Right-handed alpha
Helix 13
13
A
257 265Right-handed alpha
Helix 14
14
A
268 282Right-handed alpha
Helix 15
15
A
310 314Right-handed 310
Helix 16
16
A
340 357Right-handed alpha
Helix 17
17
B
15 27Right-handed alpha
Helix 18
18
B
58 65Right-handed alpha
Helix 19
19
B
72 81Right-handed alpha
Helix 20
20
B
102 107Right-handed alpha
Helix 21
21
B
118 122Right-handed 310
Helix 22
22
B
125 131Right-handed alpha
Helix 23
23
B
142 146Right-handed 310
Helix 24
24
B
152 163Right-handed alpha
Helix 25
25
B
174 185Right-handed alpha
Helix 26
26
B
193 204Right-handed alpha
Helix 27
27
B
211 216Right-handed alpha
Helix 28
28
B
217 232Right-handed alpha
Helix 29
29
B
249 253Right-handed 310
Helix 30
30
B
256 262Right-handed alpha
Helix 31
31
B
263 266Right-handed 310
Helix 32
32
B
267 277Right-handed alpha
Helix 33
33
B
278 280Right-handed 310
Helix 34
34
B
310 314Right-handed 310
Helix 35
35
B
340 357Right-handed alpha
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There are 3 sheets in PDB entry 1TVE. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
32 39anti-parallel
Strand 3
A
5 11parallel
Strand 4
A
87 89parallel
Strand 5
A
111 112parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 306first strand
Strand 2
A
283 292anti-parallel
Strand 3
A
166 172anti-parallel
Strand 4
A
318 325anti-parallel
Strand 5
A
332 337anti-parallel
Strand 6
B
332 337anti-parallel
Strand 7
B
318 324anti-parallel
Strand 8
B
168 172anti-parallel
Strand 9
B
283 292anti-parallel
Strand 10
B
297 306anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 46first strand
Strand 2
B
32 39anti-parallel
Strand 3
B
5 11parallel
Strand 4
B
87 91parallel
Strand 5
B
110 113parallel
Strand 6
B
140 141parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il