Analysis of interatomic Contacts of Structural Units in PDB entry:
1TZD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TZD entry

There are 2 chains in PDB entry 1TZD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 203GLU 458
B
 GLY 203ALA 457
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1TZD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
210 221Right-handed alpha
Helix 2
2
A
222 229Right-handed 310
Helix 3
3
A
269 279Right-handed alpha
Helix 4
4
A
285 290Right-handed alpha
Helix 5
5
A
298 304Right-handed alpha
Helix 6
6
A
311 321Right-handed alpha
Helix 7
7
A
349 362Right-handed alpha
Helix 8
8
A
364 383Right-handed alpha
Helix 9
9
A
385 390Right-handed alpha
Helix 10
10
A
441 457Right-handed alpha
Helix 11
11
B
211 222Right-handed alpha
Helix 12
12
B
223 229Right-handed 310
Helix 13
13
B
269 275Right-handed alpha
Helix 14
14
B
283 292Right-handed alpha
Helix 15
15
B
311 320Right-handed alpha
Helix 16
16
B
349 362Right-handed alpha
Helix 17
17
B
364 385Right-handed alpha
Helix 18
18
B
441 457Right-handed alpha
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There are 4 sheets in PDB entry 1TZD. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 206first strand
Strand 2
A
245 247anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
340 341first strand
Strand 2
A
330 334anti-parallel
Strand 3
A
257 261anti-parallel
Strand 4
A
397 402anti-parallel
Strand 5
A
408 413anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
340 341first strand
Strand 2
B
328 334anti-parallel
Strand 3
B
257 263anti-parallel
Strand 4
B
397 402anti-parallel
Strand 5
B
408 413anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
391 393first strand
Strand 2
B
418 420anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il