Analysis of interatomic Contacts of Structural Units in PDB entry:
1U02


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U02 entry

There is 1 chain in PDB entry 1U02 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2LYS 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1U02. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
18 22Right-handed 310
Helix 2
2
A
25 39Right-handed alpha
Helix 3
3
A
48 56Right-handed alpha
Helix 4
4
A
65 67Right-handed 310
Helix 5
5
A
81 84Right-handed 310
Helix 6
6
A
85 97Right-handed alpha
Helix 7
7
A
98 103Right-handed alpha
Helix 8
8
A
126 142Right-handed alpha
Helix 9
9
A
160 170Right-handed alpha
Helix 10
10
A
180 189Right-handed alpha
Helix 11
11
A
211 230Right-handed alpha
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There are 2 sheets in PDB entry 1U02. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
75 78first strand
Strand 2
A
69 72anti-parallel
Strand 3
A
61 64anti-parallel
Strand 4
A
40 44parallel
Strand 5
A
3 7parallel
Strand 6
A
174 178parallel
Strand 7
A
194 198parallel
Strand 8
A
207 209parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
107 111first strand
Strand 2
A
114 118anti-parallel
Strand 3
A
151 155anti-parallel
Strand 4
A
144 147anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il