Analysis of interatomic Contacts of Structural Units in PDB entry:
1U0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U0H entry

There are 3 chains in PDB entry 1U0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 377LEU 565
B
 HIS 879THR 1077
C
 ALA 39LEU 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1U0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
408 430Right-handed alpha
Helix 2
2
A
454 477Right-handed alpha
Helix 3
3
A
508 520Right-handed alpha
Helix 4
4
A
530 534Right-handed alpha
Helix 5
5
A
546 550Right-handed 310
Helix 6
6
A
551 557Right-handed alpha
Helix 7
7
B
894 899Right-handed alpha
Helix 8
8
B
902 906Right-handed 310
Helix 9
9
B
908 924Right-handed alpha
Helix 10
10
B
928 932Right-handed 310
Helix 11
11
B
967 991Right-handed alpha
Helix 12
12
B
1021 1033Right-handed alpha
Helix 13
13
B
1043 1051Right-handed alpha
Helix 14
14
C
52 65Right-handed alpha
Helix 15
15
C
87 113Right-handed alpha
Helix 16
16
C
124 134Right-handed alpha
Helix 17
17
C
143 156Right-handed alpha
Helix 18
18
C
156 164Right-handed alpha
Helix 19
19
C
165 169Right-handed 310
Helix 20
20
C
174 180Right-handed alpha
Helix 21
21
C
181 186Right-handed alpha
Helix 22
22
C
194 200Right-handed alpha
Helix 23
23
C
230 238Right-handed 310
Helix 24
24
C
251 255Right-handed 310
Helix 25
25
C
264 278Right-handed alpha
Helix 26
26
C
293 304Right-handed alpha
Helix 27
27
C
307 311Right-handed 310
Helix 28
28
C
312 316Right-handed 310
Helix 29
29
C
331 352Right-handed alpha
Helix 30
30
C
368 386Right-handed alpha
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There are 5 sheets in PDB entry 1U0H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
434 438first strand
Strand 2
A
441 446anti-parallel
Strand 3
A
383 398anti-parallel
Strand 4
A
485 496anti-parallel
Strand 5
A
505 506anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 483first strand
Strand 2
A
383 398anti-parallel
Strand 3
A
485 496anti-parallel
Strand 4
A
526 529parallel
Strand 5
A
561 564anti-parallel
Strand 6
A
542 544anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
934 940first strand
Strand 2
B
943 948anti-parallel
Strand 3
B
882 891anti-parallel
Strand 4
B
997 1005anti-parallel
Strand 5
B
1039 1042parallel
Strand 6
B
1068 1075anti-parallel
Strand 7
B
1056 1064anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1009 1010first strand
Strand 2
B
1016 1017anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 213first strand
Strand 2
C
218 223anti-parallel
Strand 3
C
43 47parallel
Strand 4
C
243 249parallel
Strand 5
C
287 292parallel
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