Analysis of interatomic Contacts of Structural Units in PDB entry:
1U0U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U0U entry

There are 6 chains in PDB entry 1U0U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 5GLN 393
B
 ASP 5GLN 393
C
 ASP 5GLN 393
D
 ASP 5GLN 393
E
 ASP 5GLN 393
F
 ASP 5GLN 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are110 helices in PDB entry 1U0U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 14Right-handed alpha
Helix 2
2
A
37 46Right-handed alpha
Helix 3
3
A
51 65Right-handed alpha
Helix 4
4
A
75 81Right-handed alpha
Helix 5
5
A
82 87Right-handed alpha
Helix 6
6
A
93 121Right-handed alpha
Helix 7
7
A
142 152Right-handed alpha
Helix 8
8
A
168 184Right-handed alpha
Helix 9
9
A
196 200Right-handed 310
Helix 10
10
A
208 218Right-handed alpha
Helix 11
11
A
273 291Right-handed alpha
Helix 12
12
A
292 294Right-handed 310
Helix 13
13
A
297 301Right-handed 310
Helix 14
14
A
309 321Right-handed alpha
Helix 15
15
A
327 338Right-handed alpha
Helix 16
16
A
340 342Right-handed 310
Helix 17
17
A
343 360Right-handed alpha
Helix 18
18
B
5 14Right-handed alpha
Helix 19
19
B
37 46Right-handed alpha
Helix 20
20
B
51 64Right-handed alpha
Helix 21
21
B
75 82Right-handed alpha
Helix 22
22
B
82 87Right-handed alpha
Helix 23
23
B
93 121Right-handed alpha
Helix 24
24
B
123 127Right-handed 310
Helix 25
25
B
142 152Right-handed alpha
Helix 26
26
B
168 183Right-handed alpha
Helix 27
27
B
196 200Right-handed 310
Helix 28
28
B
205 207Right-handed 310
Helix 29
29
B
208 218Right-handed alpha
Helix 30
30
B
273 291Right-handed alpha
Helix 31
31
B
292 294Right-handed 310
Helix 32
32
B
297 301Right-handed 310
Helix 33
33
B
309 320Right-handed alpha
Helix 34
34
B
327 338Right-handed alpha
Helix 35
35
B
340 342Right-handed 310
Helix 36
36
B
343 359Right-handed alpha
Helix 37
37
C
5 14Right-handed alpha
Helix 38
38
C
37 46Right-handed alpha
Helix 39
39
C
51 65Right-handed alpha
Helix 40
40
C
75 82Right-handed alpha
Helix 41
41
C
82 87Right-handed alpha
Helix 42
42
C
93 121Right-handed alpha
Helix 43
43
C
123 127Right-handed 310
Helix 44
44
C
142 151Right-handed alpha
Helix 45
45
C
168 183Right-handed alpha
Helix 46
46
C
196 200Right-handed 310
Helix 47
47
C
208 218Right-handed alpha
Helix 48
48
C
273 291Right-handed alpha
Helix 49
49
C
292 294Right-handed 310
Helix 50
50
C
297 301Right-handed 310
Helix 51
51
C
309 320Right-handed alpha
Helix 52
52
C
327 338Right-handed alpha
Helix 53
53
C
340 342Right-handed 310
Helix 54
54
C
343 360Right-handed alpha
Helix 55
55
D
6 14Right-handed alpha
Helix 56
56
D
37 45Right-handed alpha
Helix 57
57
D
51 64Right-handed alpha
Helix 58
58
D
75 82Right-handed alpha
Helix 59
59
D
82 87Right-handed alpha
Helix 60
60
D
93 121Right-handed alpha
Helix 61
61
D
123 127Right-handed 310
Helix 62
62
D
142 151Right-handed alpha
Helix 63
63
D
168 183Right-handed alpha
Helix 64
64
D
196 200Right-handed 310
Helix 65
65
D
208 218Right-handed alpha
Helix 66
66
D
273 291Right-handed alpha
Helix 67
67
D
292 294Right-handed 310
Helix 68
68
D
297 301Right-handed 310
Helix 69
69
D
309 320Right-handed alpha
Helix 70
70
D
327 338Right-handed alpha
Helix 71
71
D
340 342Right-handed 310
Helix 72
72
D
343 359Right-handed alpha
Helix 73
73
E
5 14Right-handed alpha
Helix 74
74
E
37 46Right-handed alpha
Helix 75
75
E
51 65Right-handed alpha
Helix 76
76
E
75 81Right-handed alpha
Helix 77
77
E
82 87Right-handed alpha
Helix 78
78
E
93 121Right-handed alpha
Helix 79
79
E
123 127Right-handed 310
Helix 80
80
E
142 151Right-handed alpha
Helix 81
81
E
168 183Right-handed alpha
Helix 82
82
E
196 200Right-handed 310
Helix 83
83
E
208 218Right-handed alpha
Helix 84
84
E
273 280Right-handed alpha
Helix 85
85
E
281 291Right-handed alpha
Helix 86
86
E
292 294Right-handed 310
Helix 87
87
E
297 301Right-handed 310
Helix 88
88
E
309 320Right-handed alpha
Helix 89
89
E
327 337Right-handed alpha
Helix 90
90
E
340 342Right-handed 310
Helix 91
91
E
343 359Right-handed alpha
Helix 92
92
F
5 14Right-handed alpha
Helix 93
93
F
37 46Right-handed alpha
Helix 94
94
F
51 65Right-handed alpha
Helix 95
95
F
75 81Right-handed alpha
Helix 96
96
F
82 87Right-handed alpha
Helix 97
97
F
93 121Right-handed alpha
Helix 98
98
F
123 127Right-handed 310
Helix 99
99
F
142 152Right-handed alpha
Helix 100
100
F
168 184Right-handed alpha
Helix 101
101
F
196 200Right-handed 310
Helix 102
102
F
208 218Right-handed alpha
Helix 103
103
F
272 280Right-handed alpha
Helix 104
104
F
281 291Right-handed alpha
Helix 105
105
F
292 294Right-handed 310
Helix 106
106
F
297 301Right-handed 310
Helix 107
107
F
309 320Right-handed alpha
Helix 108
108
F
327 338Right-handed alpha
Helix 109
109
F
340 342Right-handed 310
Helix 110
110
F
343 359Right-handed alpha
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There are 18 sheets in PDB entry 1U0U. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 163first strand
Strand 2
A
129 134parallel
Strand 3
A
188 195parallel
Strand 4
A
221 228anti-parallel
Strand 5
A
19 27anti-parallel
Strand 6
A
240 249anti-parallel
Strand 7
A
381 389anti-parallel
Strand 8
A
370 377anti-parallel
Strand 9
A
302 305parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 34first strand
Strand 2
A
69 71anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
B
257 262anti-parallel
Strand 3
B
265 270anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 270first strand
Strand 2
A
257 262anti-parallel
Strand 3
B
139 140anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 163first strand
Strand 2
B
129 134parallel
Strand 3
B
188 195parallel
Strand 4
B
221 228anti-parallel
Strand 5
B
20 27anti-parallel
Strand 6
B
240 249anti-parallel
Strand 7
B
381 389anti-parallel
Strand 8
B
370 377anti-parallel
Strand 9
B
302 305parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 34first strand
Strand 2
B
69 71anti-parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
158 163first strand
Strand 2
C
129 134parallel
Strand 3
C
189 195parallel
Strand 4
C
221 229anti-parallel
Strand 5
C
19 27anti-parallel
Strand 6
C
240 249anti-parallel
Strand 7
C
381 389anti-parallel
Strand 8
C
370 377anti-parallel
Strand 9
C
302 305parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 34first strand
Strand 2
C
69 71anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
139 140first strand
Strand 2
D
257 262anti-parallel
Strand 3
D
265 270anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
265 270first strand
Strand 2
C
257 262anti-parallel
Strand 3
D
139 140anti-parallel
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There are 9 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
158 163first strand
Strand 2
D
129 134parallel
Strand 3
D
188 195parallel
Strand 4
D
221 229anti-parallel
Strand 5
D
19 27anti-parallel
Strand 6
D
240 249anti-parallel
Strand 7
D
381 389anti-parallel
Strand 8
D
370 377anti-parallel
Strand 9
D
302 305parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 34first strand
Strand 2
D
69 71anti-parallel
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There are 9 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
158 163first strand
Strand 2
E
129 134parallel
Strand 3
E
188 195parallel
Strand 4
E
221 228anti-parallel
Strand 5
E
20 27anti-parallel
Strand 6
E
240 249anti-parallel
Strand 7
E
381 389anti-parallel
Strand 8
E
370 377anti-parallel
Strand 9
E
302 305parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
32 33first strand
Strand 2
E
70 71anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
139 140first strand
Strand 2
F
257 262anti-parallel
Strand 3
F
265 270anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
265 270first strand
Strand 2
E
257 262anti-parallel
Strand 3
F
139 140anti-parallel
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There are 9 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
158 163first strand
Strand 2
F
129 134parallel
Strand 3
F
189 195parallel
Strand 4
F
221 228anti-parallel
Strand 5
F
19 27anti-parallel
Strand 6
F
240 249anti-parallel
Strand 7
F
381 389anti-parallel
Strand 8
F
370 377anti-parallel
Strand 9
F
302 305parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
32 34first strand
Strand 2
F
69 71anti-parallel
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