Analysis of interatomic Contacts of Structural Units in PDB entry:
1U15


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U15 entry

There are 4 chains in PDB entry 1U15 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 17GLN 465
B
 THR 17ALA 466
C
 THR 17GLU 464
D
 THR 17ALA 466
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 1U15. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 25Right-handed alpha
Helix 2
2
A
27 32Right-handed alpha
Helix 3
3
A
34 52Right-handed alpha
Helix 4
4
A
56 76Right-handed alpha
Helix 5
5
A
87 101Right-handed alpha
Helix 6
6
A
102 109Right-handed 310
Helix 7
7
A
112 150Right-handed alpha
Helix 8
8
A
169 195Right-handed alpha
Helix 9
9
A
212 221Right-handed alpha
Helix 10
10
A
228 235Right-handed alpha
Helix 11
11
A
236 264Right-handed alpha
Helix 12
12
A
274 278Right-handed 310
Helix 13
13
A
290 315Right-handed alpha
Helix 14
14
A
322 326Right-handed 310
Helix 15
15
A
327 353Right-handed alpha
Helix 16
16
A
356 364Right-handed alpha
Helix 17
17
A
365 368Right-handed 310
Helix 18
18
A
369 380Right-handed alpha
Helix 19
19
A
383 401Right-handed alpha
Helix 20
20
A
404 408Right-handed 310
Helix 21
21
A
409 417Right-handed alpha
Helix 22
22
A
421 428Right-handed 310
Helix 23
23
A
429 435Right-handed alpha
Helix 24
24
A
444 464Right-handed alpha
Helix 25
25
B
18 26Right-handed alpha
Helix 26
26
B
27 32Right-handed alpha
Helix 27
27
B
34 52Right-handed alpha
Helix 28
28
B
56 76Right-handed alpha
Helix 29
29
B
87 101Right-handed alpha
Helix 30
30
B
102 109Right-handed 310
Helix 31
31
B
112 150Right-handed alpha
Helix 32
32
B
169 195Right-handed alpha
Helix 33
33
B
212 221Right-handed alpha
Helix 34
34
B
228 235Right-handed alpha
Helix 35
35
B
236 264Right-handed alpha
Helix 36
36
B
274 278Right-handed 310
Helix 37
37
B
290 315Right-handed alpha
Helix 38
38
B
322 326Right-handed 310
Helix 39
39
B
327 353Right-handed alpha
Helix 40
40
B
356 363Right-handed alpha
Helix 41
41
B
365 368Right-handed 310
Helix 42
42
B
369 380Right-handed alpha
Helix 43
43
B
383 401Right-handed alpha
Helix 44
44
B
404 408Right-handed 310
Helix 45
45
B
409 417Right-handed alpha
Helix 46
46
B
421 427Right-handed 310
Helix 47
47
B
429 435Right-handed alpha
Helix 48
48
B
444 464Right-handed alpha
Helix 49
49
C
18 26Right-handed alpha
Helix 50
50
C
30 33Right-handed 310
Helix 51
51
C
34 52Right-handed alpha
Helix 52
52
C
56 76Right-handed alpha
Helix 53
53
C
87 101Right-handed alpha
Helix 54
54
C
102 109Right-handed 310
Helix 55
55
C
112 150Right-handed alpha
Helix 56
56
C
169 195Right-handed alpha
Helix 57
57
C
212 221Right-handed alpha
Helix 58
58
C
228 235Right-handed alpha
Helix 59
59
C
236 264Right-handed alpha
Helix 60
60
C
274 278Right-handed 310
Helix 61
61
C
290 315Right-handed alpha
Helix 62
62
C
322 326Right-handed 310
Helix 63
63
C
327 353Right-handed alpha
Helix 64
64
C
356 363Right-handed alpha
Helix 65
65
C
365 368Right-handed 310
Helix 66
66
C
369 380Right-handed alpha
Helix 67
67
C
383 401Right-handed alpha
Helix 68
68
C
404 408Right-handed 310
Helix 69
69
C
409 415Right-handed alpha
Helix 70
70
C
421 428Right-handed 310
Helix 71
71
C
429 435Right-handed alpha
Helix 72
72
C
444 464Right-handed alpha
Helix 73
73
D
18 24Right-handed alpha
Helix 74
74
D
27 32Right-handed alpha
Helix 75
75
D
34 53Right-handed alpha
Helix 76
76
D
56 75Right-handed alpha
Helix 77
77
D
87 101Right-handed alpha
Helix 78
78
D
103 109Right-handed 310
Helix 79
79
D
112 150Right-handed alpha
Helix 80
80
D
169 195Right-handed alpha
Helix 81
81
D
212 221Right-handed alpha
Helix 82
82
D
228 235Right-handed alpha
Helix 83
83
D
236 264Right-handed alpha
Helix 84
84
D
274 278Right-handed 310
Helix 85
85
D
290 315Right-handed alpha
Helix 86
86
D
322 326Right-handed 310
Helix 87
87
D
327 353Right-handed alpha
Helix 88
88
D
356 363Right-handed alpha
Helix 89
89
D
365 368Right-handed 310
Helix 90
90
D
369 379Right-handed alpha
Helix 91
91
D
383 402Right-handed alpha
Helix 92
92
D
404 408Right-handed 310
Helix 93
93
D
409 415Right-handed alpha
Helix 94
94
D
421 427Right-handed 310
Helix 95
95
D
429 436Right-handed alpha
Helix 96
96
D
444 465Right-handed alpha
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There are 13 sheets in PDB entry 1U15. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 159first strand
Strand 2
A
162 168anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 197first strand
Strand 2
A
224 225parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 272first strand
Strand 2
A
354 355anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 155first strand
Strand 2
B
167 168anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
162 163anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 197first strand
Strand 2
B
224 225parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
271 272first strand
Strand 2
B
354 355anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
154 159first strand
Strand 2
C
162 168anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
196 197first strand
Strand 2
C
224 225parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
271 272first strand
Strand 2
C
354 355anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
154 159first strand
Strand 2
D
162 168anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
196 197first strand
Strand 2
D
224 225parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
271 272first strand
Strand 2
D
354 355anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il