Analysis of interatomic Contacts of Structural Units in PDB entry:
1U16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U16 entry

There is 1 chain in PDB entry 1U16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 16GLU 464
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1U16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 26Right-handed alpha
Helix 2
2
A
27 32Right-handed alpha
Helix 3
3
A
34 52Right-handed alpha
Helix 4
4
A
56 76Right-handed alpha
Helix 5
5
A
87 101Right-handed alpha
Helix 6
6
A
102 109Right-handed 310
Helix 7
7
A
112 150Right-handed alpha
Helix 8
8
A
169 195Right-handed alpha
Helix 9
9
A
212 221Right-handed alpha
Helix 10
10
A
228 235Right-handed alpha
Helix 11
11
A
236 264Right-handed alpha
Helix 12
12
A
274 278Right-handed 310
Helix 13
13
A
290 315Right-handed alpha
Helix 14
14
A
322 326Right-handed 310
Helix 15
15
A
327 353Right-handed alpha
Helix 16
16
A
356 363Right-handed alpha
Helix 17
17
A
365 368Right-handed 310
Helix 18
18
A
369 380Right-handed alpha
Helix 19
19
A
383 401Right-handed alpha
Helix 20
20
A
404 408Right-handed 310
Helix 21
21
A
409 417Right-handed alpha
Helix 22
22
A
421 427Right-handed 310
Helix 23
23
A
429 435Right-handed alpha
Helix 24
24
A
444 464Right-handed alpha
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There are 3 sheets in PDB entry 1U16. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 159first strand
Strand 2
A
162 168anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 197first strand
Strand 2
A
224 225parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 272first strand
Strand 2
A
354 355anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il