Analysis of interatomic Contacts of Structural Units in PDB entry:
1U1J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U1J entry

There is 1 chain in PDB entry 1U1J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLN 760
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 1U1J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 27Right-handed alpha
Helix 2
2
A
30 52Right-handed alpha
Helix 3
3
A
66 75Right-handed alpha
Helix 4
4
A
79 83Right-handed 310
Helix 5
5
A
90 100Right-handed alpha
Helix 6
6
A
135 147Right-handed alpha
Helix 7
7
A
157 164Right-handed alpha
Helix 8
8
A
176 179Right-handed 310
Helix 9
9
A
180 198Right-handed alpha
Helix 10
10
A
208 212Right-handed 310
Helix 11
11
A
215 229Right-handed alpha
Helix 12
12
A
248 256Right-handed alpha
Helix 13
13
A
273 281Right-handed alpha
Helix 14
14
A
302 317Right-handed alpha
Helix 15
15
A
329 333Right-handed 310
Helix 16
16
A
336 340Right-handed 310
Helix 17
17
A
344 349Right-handed alpha
Helix 18
18
A
353 369Right-handed alpha
Helix 19
19
A
373 390Right-handed alpha
Helix 20
20
A
396 401Right-handed alpha
Helix 21
21
A
415 418Right-handed 310
Helix 22
22
A
419 427Right-handed alpha
Helix 23
23
A
462 480Right-handed alpha
Helix 24
24
A
497 502Right-handed alpha
Helix 25
25
A
540 547Right-handed alpha
Helix 26
26
A
560 567Right-handed alpha
Helix 27
27
A
575 597Right-handed alpha
Helix 28
28
A
616 618Right-handed 310
Helix 29
29
A
619 636Right-handed alpha
Helix 30
30
A
656 662Right-handed alpha
Helix 31
31
A
678 684Right-handed 310
Helix 32
32
A
707 721Right-handed alpha
Helix 33
33
A
739 760Right-handed alpha
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There are 6 sheets in PDB entry 1U1J. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
152 156parallel
Strand 3
A
202 206parallel
Strand 4
A
237 241parallel
Strand 5
A
263 267parallel
Strand 6
A
287 293parallel
Strand 7
A
322 326parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 111first strand
Strand 2
A
118 120anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 124first strand
Strand 2
A
166 167parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 508first strand
Strand 2
A
527 528anti-parallel
Strand 3
A
569 570parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
515 518first strand
Strand 2
A
521 523anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 559first strand
Strand 2
A
601 605parallel
Strand 3
A
643 647parallel
Strand 4
A
667 669parallel
Strand 5
A
692 693parallel
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