Analysis of interatomic Contacts of Structural Units in PDB entry:
1U1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U1V entry

There is 1 chain in PDB entry 1U1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LEU 278
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1U1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 29Right-handed 310
Helix 2
2
A
30 42Right-handed alpha
Helix 3
3
A
72 84Right-handed alpha
Helix 4
4
A
85 87Right-handed 310
Helix 5
5
A
129 138Right-handed alpha
Helix 6
6
A
162 169Right-handed alpha
Helix 7
7
A
172 177Right-handed alpha
Helix 8
8
A
211 225Right-handed alpha
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There are 2 sheets in PDB entry 1U1V. Click on sheet of interest to get list of strands forming it: A, B,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 126first strand
Strand 2
A
147 150anti-parallel
Strand 3
A
154 159anti-parallel
Strand 4
A
183 190parallel
Strand 5
A
193 200anti-parallel
Strand 6
A
205 208anti-parallel
Strand 7
A
193 200anti-parallel
Strand 8
A
234 238parallel
Strand 9
A
246 255anti-parallel
Strand 10
A
258 276anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 9first strand
Strand 2
A
18 23anti-parallel
Strand 3
A
46 50parallel
Strand 4
A
58 63anti-parallel
Strand 5
A
68 69anti-parallel
Strand 6
A
58 63anti-parallel
Strand 7
A
91 96parallel
Strand 8
A
99 108anti-parallel
Strand 9
A
111 118anti-parallel
Strand 10
A
258 276anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il