Analysis of interatomic Contacts of Structural Units in PDB entry:
1U24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U24 entry

There are 2 chains in PDB entry 1U24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 23LEU 336
B
 THR 23LEU 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1U24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 35Right-handed 310
Helix 2
2
A
36 40Right-handed 310
Helix 3
3
A
70 74Right-handed 310
Helix 4
4
A
98 111Right-handed alpha
Helix 5
5
A
139 143Right-handed 310
Helix 6
6
A
149 165Right-handed alpha
Helix 7
7
A
175 179Right-handed 310
Helix 8
8
A
193 201Right-handed alpha
Helix 9
9
A
217 231Right-handed alpha
Helix 10
10
A
245 260Right-handed alpha
Helix 11
11
A
264 275Right-handed alpha
Helix 12
12
A
288 293Right-handed 310
Helix 13
13
A
294 316Right-handed alpha
Helix 14
14
A
323 330Right-handed alpha
Helix 15
15
B
30 35Right-handed 310
Helix 16
16
B
36 40Right-handed 310
Helix 17
17
B
70 74Right-handed 310
Helix 18
18
B
85 90Right-handed alpha
Helix 19
19
B
98 111Right-handed alpha
Helix 20
20
B
139 143Right-handed 310
Helix 21
21
B
149 165Right-handed alpha
Helix 22
22
B
193 200Right-handed alpha
Helix 23
23
B
217 231Right-handed alpha
Helix 24
24
B
245 260Right-handed alpha
Helix 25
25
B
264 275Right-handed alpha
Helix 26
26
B
288 293Right-handed 310
Helix 27
27
B
294 316Right-handed alpha
Helix 28
28
B
323 331Right-handed alpha
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There are 4 sheets in PDB entry 1U24. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 187first strand
Strand 2
A
168 172anti-parallel
Strand 3
A
44 47parallel
Strand 4
A
133 138anti-parallel
Strand 5
A
127 130anti-parallel
Strand 6
A
191 192anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
91 94anti-parallel
Strand 3
A
236 240parallel
Strand 4
A
117 123parallel
Strand 5
A
204 210parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
184 187first strand
Strand 2
B
168 172anti-parallel
Strand 3
B
44 47parallel
Strand 4
B
133 138anti-parallel
Strand 5
B
127 130anti-parallel
Strand 6
B
191 192anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
91 94anti-parallel
Strand 3
B
236 240parallel
Strand 4
B
117 123parallel
Strand 5
B
204 210parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il