Analysis of interatomic Contacts of Structural Units in PDB entry:
1U2J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U2J entry

There are 8 chains in PDB entry 1U2J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 432LEU 726
B
 LEU 432LEU 726
C
 LEU 432LEU 726
D
 LEU 432LEU 726
E
 LEU 432LEU 726
F
 LEU 432LEU 726
G
 LEU 432LEU 726
H
 LEU 432LEU 726
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are125 helices in PDB entry 1U2J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
446 459Right-handed alpha
Helix 2
2
A
463 476Right-handed alpha
Helix 3
3
A
490 494Right-handed 310
Helix 4
4
A
496 504Right-handed 310
Helix 5
5
A
505 508Right-handed 310
Helix 6
6
A
509 521Right-handed alpha
Helix 7
7
A
524 542Right-handed alpha
Helix 8
8
A
560 564Right-handed 310
Helix 9
9
A
565 571Right-handed alpha
Helix 10
10
A
590 602Right-handed alpha
Helix 11
11
A
605 620Right-handed alpha
Helix 12
12
A
640 648Right-handed alpha
Helix 13
13
A
678 687Right-handed alpha
Helix 14
14
A
687 699Right-handed alpha
Helix 15
15
A
702 719Right-handed alpha
Helix 16
16
A
722 726Right-handed 310
Helix 17
17
B
446 459Right-handed alpha
Helix 18
18
B
463 476Right-handed alpha
Helix 19
19
B
490 494Right-handed 310
Helix 20
20
B
496 504Right-handed 310
Helix 21
21
B
505 508Right-handed 310
Helix 22
22
B
509 521Right-handed alpha
Helix 23
23
B
524 544Right-handed alpha
Helix 24
24
B
560 564Right-handed 310
Helix 25
25
B
565 570Right-handed alpha
Helix 26
26
B
571 573Right-handed 310
Helix 27
27
B
578 581Right-handed 310
Helix 28
28
B
590 602Right-handed alpha
Helix 29
29
B
605 620Right-handed alpha
Helix 30
30
B
640 648Right-handed alpha
Helix 31
31
B
678 687Right-handed alpha
Helix 32
32
B
687 698Right-handed alpha
Helix 33
33
B
702 719Right-handed alpha
Helix 34
34
C
446 459Right-handed alpha
Helix 35
35
C
463 476Right-handed alpha
Helix 36
36
C
490 494Right-handed 310
Helix 37
37
C
496 504Right-handed 310
Helix 38
38
C
505 508Right-handed 310
Helix 39
39
C
509 521Right-handed alpha
Helix 40
40
C
524 544Right-handed alpha
Helix 41
41
C
560 564Right-handed 310
Helix 42
42
C
565 571Right-handed alpha
Helix 43
43
C
578 581Right-handed 310
Helix 44
44
C
590 602Right-handed alpha
Helix 45
45
C
605 620Right-handed alpha
Helix 46
46
C
640 648Right-handed alpha
Helix 47
47
C
678 687Right-handed alpha
Helix 48
48
C
687 698Right-handed alpha
Helix 49
49
C
702 719Right-handed alpha
Helix 50
50
C
722 726Right-handed 310
Helix 51
51
D
446 459Right-handed alpha
Helix 52
52
D
463 476Right-handed alpha
Helix 53
53
D
490 494Right-handed 310
Helix 54
54
D
496 504Right-handed 310
Helix 55
55
D
505 508Right-handed 310
Helix 56
56
D
509 521Right-handed alpha
Helix 57
57
D
524 544Right-handed alpha
Helix 58
58
D
560 564Right-handed 310
Helix 59
59
D
565 571Right-handed alpha
Helix 60
60
D
590 602Right-handed alpha
Helix 61
61
D
605 620Right-handed alpha
Helix 62
62
D
640 648Right-handed alpha
Helix 63
63
D
678 687Right-handed alpha
Helix 64
64
D
687 698Right-handed alpha
Helix 65
65
D
702 719Right-handed alpha
Helix 66
66
D
722 726Right-handed 310
Helix 67
67
E
446 459Right-handed alpha
Helix 68
68
E
463 476Right-handed alpha
Helix 69
69
E
490 494Right-handed 310
Helix 70
70
E
496 504Right-handed 310
Helix 71
71
E
509 521Right-handed alpha
Helix 72
72
E
524 544Right-handed alpha
Helix 73
73
E
560 564Right-handed 310
Helix 74
74
E
565 571Right-handed alpha
Helix 75
75
E
578 581Right-handed 310
Helix 76
76
E
590 602Right-handed alpha
Helix 77
77
E
605 620Right-handed alpha
Helix 78
78
E
640 647Right-handed alpha
Helix 79
79
E
679 687Right-handed alpha
Helix 80
80
E
687 699Right-handed alpha
Helix 81
81
E
702 719Right-handed alpha
Helix 82
82
F
446 459Right-handed alpha
Helix 83
83
F
463 476Right-handed alpha
Helix 84
84
F
490 494Right-handed 310
Helix 85
85
F
496 504Right-handed 310
Helix 86
86
F
509 521Right-handed alpha
Helix 87
87
F
524 544Right-handed alpha
Helix 88
88
F
560 564Right-handed 310
Helix 89
89
F
565 571Right-handed alpha
Helix 90
90
F
590 602Right-handed alpha
Helix 91
91
F
605 619Right-handed alpha
Helix 92
92
F
640 647Right-handed alpha
Helix 93
93
F
678 687Right-handed alpha
Helix 94
94
F
687 697Right-handed alpha
Helix 95
95
F
702 719Right-handed alpha
Helix 96
96
G
446 459Right-handed alpha
Helix 97
97
G
463 476Right-handed alpha
Helix 98
98
G
490 494Right-handed 310
Helix 99
99
G
496 504Right-handed 310
Helix 100
100
G
509 521Right-handed alpha
Helix 101
101
G
524 544Right-handed alpha
Helix 102
102
G
560 564Right-handed 310
Helix 103
103
G
565 571Right-handed alpha
Helix 104
104
G
578 581Right-handed 310
Helix 105
105
G
590 602Right-handed alpha
Helix 106
106
G
605 619Right-handed alpha
Helix 107
107
G
640 647Right-handed alpha
Helix 108
108
G
679 687Right-handed alpha
Helix 109
109
G
687 699Right-handed alpha
Helix 110
110
G
702 719Right-handed alpha
Helix 111
111
G
722 726Right-handed 310
Helix 112
112
H
446 459Right-handed alpha
Helix 113
113
H
463 476Right-handed alpha
Helix 114
114
H
490 494Right-handed 310
Helix 115
115
H
496 504Right-handed 310
Helix 116
116
H
509 521Right-handed alpha
Helix 117
117
H
524 544Right-handed alpha
Helix 118
118
H
560 564Right-handed 310
Helix 119
119
H
565 571Right-handed alpha
Helix 120
120
H
590 602Right-handed alpha
Helix 121
121
H
605 619Right-handed alpha
Helix 122
122
H
640 648Right-handed alpha
Helix 123
123
H
679 687Right-handed alpha
Helix 124
124
H
687 699Right-handed alpha
Helix 125
125
H
702 719Right-handed alpha
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There are 16 sheets in PDB entry 1U2J. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
576 577first strand
Strand 2
A
582 583anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
651 655first strand
Strand 2
A
663 667anti-parallel
Strand 3
A
673 677anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
576 577first strand
Strand 2
B
582 583anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
651 655first strand
Strand 2
B
663 667anti-parallel
Strand 3
B
673 677anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
576 577first strand
Strand 2
C
582 583anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
651 655first strand
Strand 2
C
663 667anti-parallel
Strand 3
C
673 677anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
576 577first strand
Strand 2
D
582 583anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
651 655first strand
Strand 2
D
663 667anti-parallel
Strand 3
D
673 677anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
576 577first strand
Strand 2
E
582 583anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
651 655first strand
Strand 2
E
662 667anti-parallel
Strand 3
E
673 678anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
576 577first strand
Strand 2
F
582 583anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
651 655first strand
Strand 2
F
663 667anti-parallel
Strand 3
F
673 677anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
576 577first strand
Strand 2
G
582 583anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
651 655first strand
Strand 2
G
662 667anti-parallel
Strand 3
G
673 678anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
576 577first strand
Strand 2
H
582 583anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
651 655first strand
Strand 2
H
662 667anti-parallel
Strand 3
H
673 678anti-parallel
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