Analysis of interatomic Contacts of Structural Units in PDB entry:
1U6K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U6K entry

There are 3 chains in PDB entry 1U6K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLU 283
B
 THR 2GLU 283
C
 THR 2GLU 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 1U6K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 20Right-handed alpha
Helix 2
2
A
21 25Right-handed 310
Helix 3
3
A
45 64Right-handed alpha
Helix 4
4
A
77 89Right-handed alpha
Helix 5
5
A
101 104Right-handed 310
Helix 6
6
A
105 112Right-handed alpha
Helix 7
7
A
133 151Right-handed alpha
Helix 8
8
A
152 170Right-handed alpha
Helix 9
9
A
174 178Right-handed 310
Helix 10
10
A
184 191Right-handed 310
Helix 11
11
A
196 223Right-handed alpha
Helix 12
12
A
226 258Right-handed alpha
Helix 13
13
B
14 20Right-handed alpha
Helix 14
14
B
21 25Right-handed 310
Helix 15
15
B
45 64Right-handed alpha
Helix 16
16
B
77 89Right-handed alpha
Helix 17
17
B
101 104Right-handed 310
Helix 18
18
B
105 112Right-handed alpha
Helix 19
19
B
133 151Right-handed alpha
Helix 20
20
B
152 170Right-handed alpha
Helix 21
21
B
174 178Right-handed 310
Helix 22
22
B
184 191Right-handed 310
Helix 23
23
B
196 223Right-handed alpha
Helix 24
24
B
226 258Right-handed alpha
Helix 25
25
C
14 20Right-handed alpha
Helix 26
26
C
21 25Right-handed 310
Helix 27
27
C
45 64Right-handed alpha
Helix 28
28
C
77 90Right-handed alpha
Helix 29
29
C
99 104Right-handed 310
Helix 30
30
C
105 112Right-handed alpha
Helix 31
31
C
133 151Right-handed alpha
Helix 32
32
C
152 169Right-handed alpha
Helix 33
33
C
174 178Right-handed 310
Helix 34
34
C
184 191Right-handed 310
Helix 35
35
C
196 223Right-handed alpha
Helix 36
36
C
226 258Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 1U6K. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 39first strand
Strand 2
A
4 10parallel
Strand 3
A
67 71parallel
Strand 4
A
94 99parallel
Strand 5
A
115 119parallel
Strand 6
A
180 183parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 41first strand
Strand 2
B
4 11parallel
Strand 3
B
67 71parallel
Strand 4
B
94 99parallel
Strand 5
B
115 119parallel
Strand 6
B
180 183parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 41first strand
Strand 2
C
4 11parallel
Strand 3
C
67 71parallel
Strand 4
C
94 98parallel
Strand 5
C
115 119parallel
Strand 6
C
180 183parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il