Analysis of interatomic Contacts of Structural Units in PDB entry:
1U6R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U6R entry

There are 2 chains in PDB entry 1U6R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1LYS 380
B
 PRO 1LYS 380
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 1U6R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 11Right-handed alpha
Helix 2
2
A
14 19Right-handed alpha
Helix 3
3
A
27 33Right-handed alpha
Helix 4
4
A
34 42Right-handed alpha
Helix 5
5
A
51 62Right-handed alpha
Helix 6
6
A
79 84Right-handed alpha
Helix 7
7
A
84 96Right-handed alpha
Helix 8
8
A
110 114Right-handed 310
Helix 9
9
A
146 163Right-handed alpha
Helix 10
10
A
164 168Right-handed 310
Helix 11
11
A
176 178Right-handed 310
Helix 12
12
A
179 189Right-handed alpha
Helix 13
13
A
198 203Right-handed alpha
Helix 14
14
A
244 267Right-handed alpha
Helix 15
15
A
282 286Right-handed 310
Helix 16
16
A
298 303Right-handed alpha
Helix 17
17
A
306 315Right-handed alpha
Helix 18
18
A
344 369Right-handed alpha
Helix 19
19
B
1 13Right-handed 310
Helix 20
20
B
14 19Right-handed alpha
Helix 21
21
B
27 33Right-handed alpha
Helix 22
22
B
34 42Right-handed alpha
Helix 23
23
B
51 62Right-handed alpha
Helix 24
24
B
79 84Right-handed alpha
Helix 25
25
B
84 96Right-handed alpha
Helix 26
26
B
110 114Right-handed 310
Helix 27
27
B
146 162Right-handed alpha
Helix 28
28
B
163 164Right-handed 310
Helix 29
29
B
165 168Right-handed 310
Helix 30
30
B
176 178Right-handed 310
Helix 31
31
B
179 189Right-handed alpha
Helix 32
32
B
198 204Right-handed alpha
Helix 33
33
B
244 266Right-handed alpha
Helix 34
34
B
282 286Right-handed 310
Helix 35
35
B
300 304Right-handed 310
Helix 36
36
B
306 315Right-handed alpha
Helix 37
37
B
344 368Right-handed alpha
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There are 4 sheets in PDB entry 1U6R. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 174first strand
Strand 2
A
215 219anti-parallel
Strand 3
A
224 228anti-parallel
Strand 4
A
234 241anti-parallel
Strand 5
A
125 134anti-parallel
Strand 6
A
291 297anti-parallel
Strand 7
A
332 337anti-parallel
Strand 8
A
316 319anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 273first strand
Strand 2
A
277 278anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 174first strand
Strand 2
B
215 219anti-parallel
Strand 3
B
224 228anti-parallel
Strand 4
B
234 241anti-parallel
Strand 5
B
125 134anti-parallel
Strand 6
B
291 297anti-parallel
Strand 7
B
332 337anti-parallel
Strand 8
B
316 319anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
272 273first strand
Strand 2
B
277 278anti-parallel
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