Analysis of interatomic Contacts of Structural Units in PDB entry:
1U7H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U7H entry

There are 2 chains in PDB entry 1U7H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLY 342
B
 MET 1ARG 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1U7H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 18Right-handed alpha
Helix 2
2
A
18 36Right-handed alpha
Helix 3
3
A
37 40Right-handed 310
Helix 4
4
A
74 81Right-handed 310
Helix 5
5
A
105 125Right-handed alpha
Helix 6
6
A
140 152Right-handed alpha
Helix 7
7
A
163 175Right-handed alpha
Helix 8
8
A
187 193Right-handed alpha
Helix 9
9
A
212 216Right-handed 310
Helix 10
10
A
236 242Right-handed alpha
Helix 11
11
A
249 257Right-handed alpha
Helix 12
12
A
258 262Right-handed 310
Helix 13
13
A
271 276Right-handed alpha
Helix 14
14
A
296 313Right-handed alpha
Helix 15
15
A
333 339Right-handed 310
Helix 16
16
B
6 18Right-handed alpha
Helix 17
17
B
18 36Right-handed alpha
Helix 18
18
B
37 40Right-handed 310
Helix 19
19
B
75 81Right-handed 310
Helix 20
20
B
105 125Right-handed alpha
Helix 21
21
B
140 152Right-handed alpha
Helix 22
22
B
163 175Right-handed alpha
Helix 23
23
B
187 193Right-handed alpha
Helix 24
24
B
212 216Right-handed 310
Helix 25
25
B
236 242Right-handed alpha
Helix 26
26
B
249 257Right-handed alpha
Helix 27
27
B
258 262Right-handed 310
Helix 28
28
B
271 276Right-handed alpha
Helix 29
29
B
296 315Right-handed alpha
Helix 30
30
B
333 339Right-handed 310
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There are 6 sheets in PDB entry 1U7H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 49first strand
Strand 2
A
54 61anti-parallel
Strand 3
A
65 73anti-parallel
Strand 4
A
87 93anti-parallel
Strand 5
A
99 104anti-parallel
Strand 6
A
3 5parallel
Strand 7
A
318 319anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 184first strand
Strand 2
A
156 160parallel
Strand 3
A
131 135parallel
Strand 4
A
197 200parallel
Strand 5
A
221 224parallel
Strand 6
A
289 292parallel
Strand 7
A
244 247parallel
Strand 8
A
269 270parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 211first strand
Strand 2
A
233 235parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 49first strand
Strand 2
B
54 61anti-parallel
Strand 3
B
65 73anti-parallel
Strand 4
B
85 93anti-parallel
Strand 5
B
99 104anti-parallel
Strand 6
B
2 5parallel
Strand 7
B
318 320anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 184first strand
Strand 2
B
156 160parallel
Strand 3
B
131 135parallel
Strand 4
B
197 200parallel
Strand 5
B
221 224parallel
Strand 6
B
289 292parallel
Strand 7
B
244 247parallel
Strand 8
B
269 270parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 211first strand
Strand 2
B
233 235parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il