Analysis of interatomic Contacts of Structural Units in PDB entry:
1U7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U7V entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 5 chains in PDB entry 1U7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 270SER 464
A
 MET 466MET 466
C
 ALA 272SER 464
C
 MET 466MET 466
B
 ILE 314GLN 549
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 1U7V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
322 329Right-handed alpha
Helix 2
2
A
359 366Right-handed alpha
Helix 3
3
A
387 396Right-handed alpha
Helix 4
4
A
401 407Right-handed alpha
Helix 5
5
A
408 411Right-handed 310
Helix 6
6
A
430 434Right-handed 310
Helix 7
7
A
443 454Right-handed alpha
Helix 8
8
C
322 330Right-handed alpha
Helix 9
9
C
359 367Right-handed alpha
Helix 10
10
C
387 398Right-handed alpha
Helix 11
11
C
401 407Right-handed alpha
Helix 12
12
C
408 411Right-handed 310
Helix 13
13
C
430 434Right-handed 310
Helix 14
14
C
442 454Right-handed alpha
Helix 15
15
B
363 367Right-handed 310
Helix 16
16
B
373 381Right-handed alpha
Helix 17
17
B
411 418Right-handed alpha
Helix 18
18
B
439 460Right-handed alpha
Helix 19
19
B
491 496Right-handed alpha
Helix 20
20
B
517 521Right-handed 310
Helix 21
21
B
529 541Right-handed alpha
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There are 8 sheets in PDB entry 1U7V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
275 281anti-parallel
Strand 3
A
290 292anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
275 281anti-parallel
Strand 3
A
437 442anti-parallel
Strand 4
A
413 418anti-parallel
Strand 5
A
355 358anti-parallel
Strand 6
A
374 376anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 312first strand
Strand 2
A
296 300parallel
Strand 3
A
336 341anti-parallel
Strand 4
A
344 349anti-parallel
Strand 5
A
381 386anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
284 285first strand
Strand 2
C
276 281anti-parallel
Strand 3
C
290 291anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
284 285first strand
Strand 2
C
276 281anti-parallel
Strand 3
C
437 441anti-parallel
Strand 4
C
413 418anti-parallel
Strand 5
C
355 358anti-parallel
Strand 6
C
374 376anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
310 312first strand
Strand 2
C
296 300parallel
Strand 3
C
336 341anti-parallel
Strand 4
C
344 349anti-parallel
Strand 5
C
381 386anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
339 342first strand
Strand 2
B
322 329anti-parallel
Strand 3
B
524 528anti-parallel
Strand 4
B
500 505anti-parallel
Strand 5
B
407 410anti-parallel
Strand 6
B
427 429anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 350first strand
Strand 2
B
387 391anti-parallel
Strand 3
B
397 400anti-parallel
Strand 4
B
434 438anti-parallel
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