Analysis of interatomic Contacts of Structural Units in PDB entry:
1U8X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U8X entry

There is 1 chain in PDB entry 1U8X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 LYS 3PRO 445
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1U8X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
17 28Right-handed alpha
Helix 2
2
X
43 62Right-handed alpha
Helix 3
3
X
72 78Right-handed alpha
Helix 4
4
X
90 104Right-handed alpha
Helix 5
5
X
113 139Right-handed alpha
Helix 6
6
X
150 162Right-handed alpha
Helix 7
7
X
172 186Right-handed alpha
Helix 8
8
X
189 191Right-handed 310
Helix 9
9
X
217 229Right-handed alpha
Helix 10
10
X
245 256Right-handed alpha
Helix 11
11
X
266 271Right-handed alpha
Helix 12
12
X
271 277Right-handed alpha
Helix 13
13
X
284 293Right-handed alpha
Helix 14
14
X
300 308Right-handed alpha
Helix 15
15
X
321 334Right-handed alpha
Helix 16
16
X
378 402Right-handed alpha
Helix 17
17
X
403 414Right-handed alpha
Helix 18
18
X
419 434Right-handed alpha
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There are 3 sheets in PDB entry 1U8X. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
66 70first strand
Strand 2
X
34 40parallel
Strand 3
X
6 11parallel
Strand 4
X
82 85parallel
Strand 5
X
143 146parallel
Strand 6
X
167 169parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
193 200first strand
Strand 2
X
203 211anti-parallel
Strand 3
X
261 262anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
337 344first strand
Strand 2
X
357 365anti-parallel
Strand 3
X
368 371anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il