Analysis of interatomic Contacts of Structural Units in PDB entry:
1UAR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UAR entry

There are 2 chains in PDB entry 1UAR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2TYR 239
A
 ARG 241GLU 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1UAR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 7Right-handed 310
Helix 2
2
A
11 17Right-handed alpha
Helix 3
3
A
34 39Right-handed alpha
Helix 4
4
A
48 54Right-handed alpha
Helix 5
5
A
63 74Right-handed alpha
Helix 6
6
A
87 89Right-handed 310
Helix 7
7
A
90 103Right-handed alpha
Helix 8
8
A
113 122Right-handed alpha
Helix 9
9
A
143 145Right-handed 310
Helix 10
10
A
149 162Right-handed alpha
Helix 11
11
A
172 177Right-handed alpha
Helix 12
12
A
204 209Right-handed 310
Helix 13
13
A
217 226Right-handed alpha
Helix 14
14
A
227 229Right-handed 310
Helix 15
15
A
242 255Right-handed alpha
Helix 16
16
A
267 273Right-handed alpha
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There are 2 sheets in PDB entry 1UAR. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
108 111parallel
Strand 3
A
81 85parallel
Strand 4
A
24 29parallel
Strand 5
A
45 47parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
262 265parallel
Strand 3
A
235 239parallel
Strand 4
A
165 169parallel
Strand 5
A
201 202parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il