Analysis of interatomic Contacts of Structural Units in PDB entry:
1UAS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UAS entry

There is 1 chain in PDB entry 1UAS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 1ASN 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 1UAS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 20Right-handed alpha
Helix 2
2
A
24 38Right-handed alpha
Helix 3
3
A
39 44Right-handed alpha
Helix 4
4
A
75 86Right-handed alpha
Helix 5
5
A
111 123Right-handed alpha
Helix 6
6
A
138 154Right-handed alpha
Helix 7
7
A
168 176Right-handed 310
Helix 8
8
A
189 202Right-handed alpha
Helix 9
9
A
203 207Right-handed 310
Helix 10
10
A
226 240Right-handed alpha
Helix 11
11
A
254 262Right-handed alpha
Helix 12
12
A
263 271Right-handed alpha
Helix 13
13
A
318 320Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 1UAS. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
A
179 181parallel
Strand 3
A
158 162parallel
Strand 4
A
126 130parallel
Strand 5
A
89 95parallel
Strand 6
A
47 49parallel
Strand 7
A
11 14parallel
Strand 8
A
244 246parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 284first strand
Strand 2
A
287 293anti-parallel
Strand 3
A
299 305anti-parallel
Strand 4
A
354 361anti-parallel
Strand 5
A
327 332anti-parallel
Strand 6
A
337 342anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 316first strand
Strand 2
A
344 349anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il