Analysis of interatomic Contacts of Structural Units in PDB entry:
1UAY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UAY entry

There are 2 chains in PDB entry 1UAY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2ARG 242
B
 MET 1ARG 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1UAY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 26Right-handed alpha
Helix 2
2
A
50 65Right-handed alpha
Helix 3
3
A
90 102Right-handed alpha
Helix 4
4
A
102 117Right-handed alpha
Helix 5
5
A
136 141Right-handed alpha
Helix 6
6
A
145 167Right-handed alpha
Helix 7
7
A
183 188Right-handed alpha
Helix 8
8
A
190 199Right-handed alpha
Helix 9
9
A
209 223Right-handed alpha
Helix 10
10
B
12 26Right-handed alpha
Helix 11
11
B
50 65Right-handed alpha
Helix 12
12
B
90 102Right-handed alpha
Helix 13
13
B
102 117Right-handed alpha
Helix 14
14
B
136 141Right-handed alpha
Helix 15
15
B
145 167Right-handed alpha
Helix 16
16
B
190 199Right-handed alpha
Helix 17
17
B
209 223Right-handed alpha
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There are 2 sheets in PDB entry 1UAY. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 45first strand
Strand 2
A
28 33parallel
Strand 3
A
4 8parallel
Strand 4
A
67 72parallel
Strand 5
A
128 133parallel
Strand 6
A
171 178parallel
Strand 7
A
230 233parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 45first strand
Strand 2
B
28 33parallel
Strand 3
B
4 8parallel
Strand 4
B
67 72parallel
Strand 5
B
128 133parallel
Strand 6
B
171 178parallel
Strand 7
B
230 233parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il