Analysis of interatomic Contacts of Structural Units in PDB entry:
1UC2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UC2 entry

There are 2 chains in PDB entry 1UC2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2GLY 481
B
 VAL 2GLY 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 1UC2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 40Right-handed alpha
Helix 2
2
A
42 51Right-handed alpha
Helix 3
3
A
88 92Right-handed 310
Helix 4
4
A
108 113Right-handed alpha
Helix 5
5
A
115 127Right-handed alpha
Helix 6
6
A
144 158Right-handed alpha
Helix 7
7
A
162 174Right-handed 310
Helix 8
8
A
179 183Right-handed 310
Helix 9
9
A
184 192Right-handed alpha
Helix 10
10
A
193 195Right-handed 310
Helix 11
11
A
215 222Right-handed alpha
Helix 12
12
A
237 256Right-handed alpha
Helix 13
13
A
257 259Right-handed 310
Helix 14
14
A
275 312Right-handed alpha
Helix 15
15
A
391 398Right-handed alpha
Helix 16
16
A
411 419Right-handed alpha
Helix 17
17
A
420 431Right-handed alpha
Helix 18
18
A
439 446Right-handed alpha
Helix 19
19
A
447 451Right-handed 310
Helix 20
20
A
453 465Right-handed alpha
Helix 21
21
B
31 41Right-handed alpha
Helix 22
22
B
42 51Right-handed alpha
Helix 23
23
B
88 92Right-handed 310
Helix 24
24
B
108 113Right-handed alpha
Helix 25
25
B
115 127Right-handed alpha
Helix 26
26
B
140 143Right-handed 310
Helix 27
27
B
144 151Right-handed alpha
Helix 28
28
B
151 158Right-handed alpha
Helix 29
29
B
162 174Right-handed 310
Helix 30
30
B
179 183Right-handed 310
Helix 31
31
B
184 192Right-handed alpha
Helix 32
32
B
193 195Right-handed 310
Helix 33
33
B
215 222Right-handed alpha
Helix 34
34
B
239 255Right-handed alpha
Helix 35
35
B
255 260Right-handed alpha
Helix 36
36
B
275 312Right-handed alpha
Helix 37
37
B
365 369Right-handed 310
Helix 38
38
B
391 398Right-handed alpha
Helix 39
39
B
411 419Right-handed alpha
Helix 40
40
B
420 431Right-handed alpha
Helix 41
41
B
439 446Right-handed alpha
Helix 42
42
B
447 451Right-handed 310
Helix 43
43
B
453 465Right-handed alpha
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There are 10 sheets in PDB entry 1UC2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
12 15anti-parallel
Strand 3
A
26 29anti-parallel
Strand 4
A
60 67parallel
Strand 5
A
74 81anti-parallel
Strand 6
A
342 351anti-parallel
Strand 7
A
330 339anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 87first strand
Strand 2
A
271 272anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 328first strand
Strand 2
A
99 103anti-parallel
Strand 3
A
229 235anti-parallel
Strand 4
A
204 213anti-parallel
Strand 5
A
468 480anti-parallel
Strand 6
A
385 389anti-parallel
Strand 7
A
374 377anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 328first strand
Strand 2
A
99 103anti-parallel
Strand 3
A
229 235anti-parallel
Strand 4
A
204 213anti-parallel
Strand 5
A
468 480anti-parallel
Strand 6
A
434 437parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 355first strand
Strand 2
A
401 403anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 7first strand
Strand 2
B
12 15anti-parallel
Strand 3
B
26 29anti-parallel
Strand 4
B
60 67parallel
Strand 5
B
74 81anti-parallel
Strand 6
B
342 351anti-parallel
Strand 7
B
330 339anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 87first strand
Strand 2
B
271 272anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
323 328first strand
Strand 2
B
99 103anti-parallel
Strand 3
B
229 235anti-parallel
Strand 4
B
204 213anti-parallel
Strand 5
B
468 480anti-parallel
Strand 6
B
385 389anti-parallel
Strand 7
B
374 377anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
323 328first strand
Strand 2
B
99 103anti-parallel
Strand 3
B
229 235anti-parallel
Strand 4
B
204 213anti-parallel
Strand 5
B
468 480anti-parallel
Strand 6
B
434 437parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
353 355first strand
Strand 2
B
401 403anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il