Analysis of interatomic Contacts of Structural Units in PDB entry:
1UC7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UC7 entry

There are 2 chains in PDB entry 1UC7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PRO 125
B
 ALA 1002PRO 1125
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1UC7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 26Right-handed alpha
Helix 2
2
A
40 50Right-handed alpha
Helix 3
3
A
53 60Right-handed alpha
Helix 4
4
A
74 85Right-handed alpha
Helix 5
5
A
102 106Right-handed 310
Helix 6
6
A
112 124Right-handed alpha
Helix 7
7
B
1015 1026Right-handed alpha
Helix 8
8
B
1040 1050Right-handed alpha
Helix 9
9
B
1053 1060Right-handed alpha
Helix 10
10
B
1074 1084Right-handed alpha
Helix 11
11
B
1102 1106Right-handed 310
Helix 12
12
B
1112 1123Right-handed alpha
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There are 3 sheets in PDB entry 1UC7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
B
1004 1008anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
64 69parallel
Strand 3
A
31 36parallel
Strand 4
A
91 95anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1011 1012first strand
Strand 2
B
1064 1069parallel
Strand 3
B
1031 1036parallel
Strand 4
B
1091 1095anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il