Analysis of interatomic Contacts of Structural Units in PDB entry:
1UD0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UD0 entry

There are 4 chains in PDB entry 1UD0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 537GLY 620
B
 ARG 537PRO 618
C
 LEU 534MSE 621
D
 ARG 537ALA 614
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 1UD0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
538 554Right-handed alpha
Helix 2
2
A
555 559Right-handed 310
Helix 3
3
A
563 596Right-handed alpha
Helix 4
4
A
596 611Right-handed alpha
Helix 5
5
B
537 552Right-handed alpha
Helix 6
6
B
567 601Right-handed alpha
Helix 7
7
B
603 611Right-handed alpha
Helix 8
8
C
535 552Right-handed alpha
Helix 9
9
C
563 612Right-handed alpha
Helix 10
10
D
541 554Right-handed alpha
Helix 11
11
D
555 559Right-handed 310
Helix 12
12
D
563 613Right-handed alpha
Back to top of page
There are no sheets in PDB entry 1UD0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il