Analysis of interatomic Contacts of Structural Units in PDB entry:
1UEA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UEA entry

There are 4 chains in PDB entry 1UEA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 83PRO 250
B
 CYS 1SER 181
C
 PHE 83PRO 250
D
 CYS 1SER 181
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1UEA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
109 128Right-handed alpha
Helix 2
2
A
194 208Right-handed alpha
Helix 3
3
A
235 247Right-handed 310
Helix 4
21
B
7 15Right-handed alpha
Helix 5
22
B
109 118Right-handed alpha
Helix 6
23
B
119 124Right-handed 310
Helix 7
24
B
158 164Right-handed 310
Helix 8
31
C
109 128Right-handed alpha
Helix 9
32
C
194 208Right-handed alpha
Helix 10
33
C
235 247Right-handed 310
Helix 11
41
D
7 15Right-handed alpha
Helix 12
42
D
109 118Right-handed alpha
Helix 13
43
D
119 124Right-handed 310
Helix 14
44
D
158 164Right-handed 310
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There are 14 sheets in PDB entry 1UEA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 103first strand
Strand 2
A
142 147parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 135first strand
Strand 2
A
164 168parallel
Strand 3
A
176 182anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 30first strand
Strand 2
B
81 91anti-parallel
Strand 3
B
101 105anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 46first strand
Strand 2
B
59 65anti-parallel
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There are 1 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 96first strand
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 132first strand
Strand 2
B
143 147parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 170first strand
Strand 2
B
173 179anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
95 103first strand
Strand 2
C
142 147parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 135first strand
Strand 2
C
164 168parallel
Strand 3
C
176 182anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
17 30first strand
Strand 2
D
81 91anti-parallel
Strand 3
D
101 105anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 46first strand
Strand 2
D
59 65anti-parallel
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There are 1 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
93 96first strand
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
128 132first strand
Strand 2
D
143 147parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
163 170first strand
Strand 2
D
173 179anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il