Analysis of interatomic Contacts of Structural Units in PDB entry:
1UEE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UEE entry

There are 2 chains in PDB entry 1UEE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1LEU 496
B
 GLU 499THR 505
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1UEE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
79 99Right-handed alpha
Helix 2
2
A
100 113Right-handed alpha
Helix 3
3
A
129 133Right-handed 310
Helix 4
4
A
173 177Right-handed 310
Helix 5
5
A
199 203Right-handed 310
Helix 6
6
A
215 232Right-handed alpha
Helix 7
7
A
259 266Right-handed alpha
Helix 8
8
A
274 281Right-handed alpha
Helix 9
9
A
282 297Right-handed alpha
Helix 10
10
A
308 320Right-handed alpha
Helix 11
11
A
333 346Right-handed alpha
Helix 12
12
A
349 354Right-handed alpha
Helix 13
13
A
364 368Right-handed 310
Helix 14
14
A
394 399Right-handed alpha
Helix 15
15
A
400 404Right-handed 310
Helix 16
16
A
436 438Right-handed 310
Helix 17
17
A
443 447Right-handed 310
Helix 18
18
A
450 455Right-handed alpha
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There are 6 sheets in PDB entry 1UEE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 146first strand
Strand 2
A
134 138anti-parallel
Strand 3
A
18 22anti-parallel
Strand 4
A
32 38anti-parallel
Strand 5
A
41 47anti-parallel
Strand 6
A
150 154parallel
Strand 7
A
183 186parallel
Strand 8
A
163 164anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
301 303parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 213first strand
Strand 2
A
191 197anti-parallel
Strand 3
A
371 374anti-parallel
Strand 4
A
413 414anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 243first strand
Strand 2
A
256 258anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 325first strand
Strand 2
A
329 331anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 426first strand
Strand 2
A
433 434anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il