Analysis of interatomic Contacts of Structural Units in PDB entry:
1UEK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UEK entry

There is 1 chain in PDB entry 1UEK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1UEK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
54 57Right-handed 310
Helix 2
2
A
58 71Right-handed alpha
Helix 3
3
A
92 109Right-handed alpha
Helix 4
4
A
114 123Right-handed alpha
Helix 5
5
A
125 132Right-handed alpha
Helix 6
6
A
164 171Right-handed alpha
Helix 7
7
A
173 177Right-handed 310
Helix 8
8
A
182 193Right-handed alpha
Helix 9
9
A
202 210Right-handed alpha
Helix 10
10
A
211 223Right-handed alpha
Helix 11
11
A
243 255Right-handed alpha
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There are 3 sheets in PDB entry 1UEK. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 18first strand
Strand 2
A
24 44anti-parallel
Strand 3
A
76 82anti-parallel
Strand 4
A
48 51parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 18first strand
Strand 2
A
24 44anti-parallel
Strand 3
A
134 138anti-parallel
Strand 4
A
143 147anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 230first strand
Strand 2
A
237 240anti-parallel
Strand 3
A
152 158anti-parallel
Strand 4
A
259 265anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il