Analysis of interatomic Contacts of Structural Units in PDB entry:
1UFA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UFA entry

There is 1 chain in PDB entry 1UFA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1PHE 517
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1UFA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 35Right-handed alpha
Helix 2
2
A
35 49Right-handed alpha
Helix 3
3
A
60 68Right-handed alpha
Helix 4
4
A
69 95Right-handed alpha
Helix 5
5
A
99 120Right-handed alpha
Helix 6
6
A
123 135Right-handed alpha
Helix 7
7
A
148 152Right-handed 310
Helix 8
8
A
154 174Right-handed alpha
Helix 9
9
A
182 186Right-handed 310
Helix 10
10
A
207 215Right-handed alpha
Helix 11
11
A
223 229Right-handed alpha
Helix 12
12
A
247 252Right-handed 310
Helix 13
13
A
266 275Right-handed alpha
Helix 14
14
A
279 283Right-handed 310
Helix 15
15
A
309 313Right-handed 310
Helix 16
16
A
317 343Right-handed alpha
Helix 17
17
A
355 357Right-handed 310
Helix 18
18
A
363 377Right-handed alpha
Helix 19
19
A
385 390Right-handed alpha
Helix 20
20
A
405 409Right-handed 310
Helix 21
21
A
415 417Right-handed 310
Helix 22
22
A
418 439Right-handed alpha
Helix 23
23
A
442 457Right-handed alpha
Helix 24
24
A
459 468Right-handed alpha
Helix 25
25
A
470 492Right-handed alpha
Helix 26
26
A
493 504Right-handed alpha
Helix 27
27
A
511 516Right-handed 310
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There are 5 sheets in PDB entry 1UFA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 181first strand
Strand 2
A
137 142parallel
Strand 3
A
55 59parallel
Strand 4
A
2 10parallel
Strand 5
A
347 353parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 181first strand
Strand 2
A
137 142parallel
Strand 3
A
55 59parallel
Strand 4
A
2 10parallel
Strand 5
A
381 383parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 193first strand
Strand 2
A
203 205anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 222first strand
Strand 2
A
261 264parallel
Strand 3
A
254 255anti-parallel
Strand 4
A
395 396parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
314 315anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il