Analysis of interatomic Contacts of Structural Units in PDB entry:
1UFQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UFQ entry

There are 4 chains in PDB entry 1UFQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 19ASN 230
B
 GLU 19ASN 230
C
 GLU 19ASN 230
D
 GLU 19ASN 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 1UFQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 44Right-handed alpha
Helix 2
2
A
45 49Right-handed 310
Helix 3
3
A
62 65Right-handed 310
Helix 4
4
A
69 78Right-handed alpha
Helix 5
5
A
85 89Right-handed 310
Helix 6
6
A
90 103Right-handed alpha
Helix 7
7
A
142 147Right-handed alpha
Helix 8
8
A
158 174Right-handed alpha
Helix 9
9
A
177 188Right-handed alpha
Helix 10
10
A
188 197Right-handed alpha
Helix 11
11
A
198 204Right-handed 310
Helix 12
12
A
214 229Right-handed alpha
Helix 13
13
B
32 43Right-handed alpha
Helix 14
14
B
62 65Right-handed 310
Helix 15
15
B
69 78Right-handed alpha
Helix 16
16
B
85 89Right-handed 310
Helix 17
17
B
90 103Right-handed alpha
Helix 18
18
B
142 147Right-handed alpha
Helix 19
19
B
158 173Right-handed alpha
Helix 20
20
B
177 188Right-handed alpha
Helix 21
21
B
188 197Right-handed alpha
Helix 22
22
B
198 204Right-handed 310
Helix 23
23
B
214 230Right-handed alpha
Helix 24
24
C
32 44Right-handed alpha
Helix 25
25
C
45 49Right-handed 310
Helix 26
26
C
62 65Right-handed 310
Helix 27
27
C
69 78Right-handed alpha
Helix 28
28
C
85 89Right-handed 310
Helix 29
29
C
90 103Right-handed alpha
Helix 30
30
C
142 147Right-handed alpha
Helix 31
31
C
158 175Right-handed alpha
Helix 32
32
C
177 188Right-handed alpha
Helix 33
33
C
188 196Right-handed alpha
Helix 34
34
C
197 204Right-handed 310
Helix 35
35
C
214 230Right-handed alpha
Helix 36
36
D
32 44Right-handed alpha
Helix 37
37
D
45 49Right-handed 310
Helix 38
38
D
62 65Right-handed 310
Helix 39
39
D
69 79Right-handed alpha
Helix 40
40
D
85 89Right-handed 310
Helix 41
41
D
90 103Right-handed alpha
Helix 42
42
D
142 149Right-handed alpha
Helix 43
43
D
158 172Right-handed alpha
Helix 44
44
D
177 188Right-handed alpha
Helix 45
45
D
188 196Right-handed alpha
Helix 46
46
D
197 204Right-handed 310
Helix 47
47
D
214 229Right-handed alpha
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There are 9 sheets in PDB entry 1UFQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 60first strand
Strand 2
A
131 135parallel
Strand 3
A
21 26parallel
Strand 4
A
151 156parallel
Strand 5
A
206 209parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 109first strand
Strand 2
A
124 126anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 60first strand
Strand 2
B
131 135parallel
Strand 3
B
21 27parallel
Strand 4
B
151 156parallel
Strand 5
B
206 209parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 113first strand
Strand 2
B
118 126anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 60first strand
Strand 2
C
131 135parallel
Strand 3
C
21 27parallel
Strand 4
C
151 156parallel
Strand 5
C
206 209parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
107 109first strand
Strand 2
C
124 126anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 113first strand
Strand 2
C
118 119anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 60first strand
Strand 2
D
131 135parallel
Strand 3
D
21 27parallel
Strand 4
D
151 156parallel
Strand 5
D
206 209parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
107 113first strand
Strand 2
D
118 126anti-parallel
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