Analysis of interatomic Contacts of Structural Units in PDB entry:
1UGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UGH entry

There are 2 chains in PDB entry 1UGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 MET 82LEU 304
I
 ASN 3LEU 84
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1UGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
E
87 96Right-handed alpha
Helix 2
2
E
100 115Right-handed alpha
Helix 3
3
E
122 124Right-handed 310
Helix 4
4
E
127 131Right-handed alpha
Helix 5
5
E
134 136Right-handed 310
Helix 6
6
E
168 180Right-handed alpha
Helix 7
7
E
192 198Right-handed 310
Helix 8
8
E
222 236Right-handed alpha
Helix 9
9
E
247 252Right-handed alpha
Helix 10
10
E
274 276Right-handed 310
Helix 11
11
E
283 294Right-handed alpha
Helix 12
12
I
4 12Right-handed alpha
Helix 13
13
I
26 33Right-handed alpha
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There are 2 sheets in PDB entry 1UGH. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
200 204first strand
Strand 2
E
139 143parallel
Strand 3
E
241 245parallel
Strand 4
E
262 266parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
18 24first strand
Strand 2
I
41 48anti-parallel
Strand 3
I
53 60anti-parallel
Strand 4
I
67 73anti-parallel
Strand 5
I
79 83anti-parallel
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