Analysis of interatomic Contacts of Structural Units in PDB entry:
1UH8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UH8 entry

There is 1 chain in PDB entry 1UH8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLU 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1UH8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
59 63Right-handed 310
Helix 2
2
A
111 116Right-handed alpha
Helix 3
3
A
127 131Right-handed 310
Helix 4
4
A
138 146Right-handed alpha
Helix 5
5
A
160 164Right-handed 310
Helix 6
6
A
228 238Right-handed alpha
Helix 7
7
A
253 257Right-handed 310
Helix 8
8
A
272 275Right-handed 310
Helix 9
9
A
300 305Right-handed alpha
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There are 5 sheets in PDB entry 1UH8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 76first strand
Strand 2
A
82 94anti-parallel
Strand 3
A
16 23anti-parallel
Strand 4
A
5 11anti-parallel
Strand 5
A
167 171anti-parallel
Strand 6
A
153 158anti-parallel
Strand 7
A
307 312anti-parallel
Strand 8
A
317 322anti-parallel
Strand 9
A
184 187anti-parallel
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There are 13 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 76first strand
Strand 2
A
82 94anti-parallel
Strand 3
A
97 110anti-parallel
Strand 4
A
41 44parallel
Strand 5
A
121 124anti-parallel
Strand 6
A
28 35parallel
Strand 7
A
16 23anti-parallel
Strand 8
A
5 11anti-parallel
Strand 9
A
167 171anti-parallel
Strand 10
A
153 158anti-parallel
Strand 11
A
307 312anti-parallel
Strand 12
A
317 322anti-parallel
Strand 13
A
184 187anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 199first strand
Strand 2
A
213 217anti-parallel
Strand 3
A
297 299parallel
Strand 4
A
224 227anti-parallel
Strand 5
A
289 292parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 210first strand
Strand 2
A
201 204anti-parallel
Strand 3
A
260 264anti-parallel
Strand 4
A
267 271anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 242first strand
Strand 2
A
248 250anti-parallel
Strand 3
A
284 287anti-parallel
Strand 4
A
277 281anti-parallel
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