Analysis of interatomic Contacts of Structural Units in PDB entry:
1UIU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UIU entry

There are 2 chains in PDB entry 1UIU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4PRO 499
B
 ASP 1004PRO 1499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 1UIU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 34Right-handed alpha
Helix 2
2
A
80 93Right-handed alpha
Helix 3
3
A
94 99Right-handed 310
Helix 4
4
A
101 106Right-handed alpha
Helix 5
5
A
128 134Right-handed alpha
Helix 6
6
A
143 145Right-handed 310
Helix 7
7
A
201 211Right-handed alpha
Helix 8
8
A
225 235Right-handed alpha
Helix 9
9
A
262 273Right-handed alpha
Helix 10
10
A
274 282Right-handed alpha
Helix 11
11
A
311 322Right-handed alpha
Helix 12
12
A
350 366Right-handed alpha
Helix 13
13
A
377 388Right-handed alpha
Helix 14
14
A
404 411Right-handed alpha
Helix 15
15
A
416 422Right-handed alpha
Helix 16
16
A
427 441Right-handed alpha
Helix 17
17
A
443 461Right-handed alpha
Helix 18
18
A
478 481Right-handed 310
Helix 19
19
A
493 497Right-handed 310
Helix 20
20
B
1026 1034Right-handed alpha
Helix 21
21
B
1080 1093Right-handed alpha
Helix 22
22
B
1094 1098Right-handed 310
Helix 23
23
B
1101 1106Right-handed alpha
Helix 24
24
B
1128 1134Right-handed alpha
Helix 25
25
B
1143 1147Right-handed 310
Helix 26
26
B
1201 1211Right-handed alpha
Helix 27
27
B
1225 1233Right-handed alpha
Helix 28
28
B
1262 1273Right-handed alpha
Helix 29
29
B
1274 1283Right-handed alpha
Helix 30
30
B
1311 1322Right-handed alpha
Helix 31
31
B
1350 1366Right-handed alpha
Helix 32
32
B
1377 1388Right-handed alpha
Helix 33
33
B
1404 1411Right-handed alpha
Helix 34
34
B
1416 1422Right-handed alpha
Helix 35
35
B
1427 1439Right-handed alpha
Helix 36
36
B
1443 1461Right-handed alpha
Helix 37
37
B
1478 1481Right-handed 310
Helix 38
38
B
1493 1497Right-handed 310
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There are 13 sheets in PDB entry 1UIU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 10first strand
Strand 2
A
193 198parallel
Strand 3
A
175 180anti-parallel
Strand 4
A
165 171anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
46 48anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
62 67anti-parallel
Strand 3
A
117 122anti-parallel
Strand 4
A
107 114anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
151 156anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 219first strand
Strand 2
A
464 476anti-parallel
Strand 3
A
288 289anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 219first strand
Strand 2
A
464 476anti-parallel
Strand 3
A
239 253anti-parallel
Strand 4
A
392 396anti-parallel
Strand 5
A
341 347parallel
Strand 6
A
370 376parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 335first strand
Strand 2
A
338 339anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1006 1010first strand
Strand 2
B
1193 1198parallel
Strand 3
B
1175 1180anti-parallel
Strand 4
B
1165 1171anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1038 1040first strand
Strand 2
B
1046 1048anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1051 1055first strand
Strand 2
B
1062 1067anti-parallel
Strand 3
B
1117 1122anti-parallel
Strand 4
B
1107 1112anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1216 1219first strand
Strand 2
B
1464 1476anti-parallel
Strand 3
B
1287 1289anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1216 1219first strand
Strand 2
B
1464 1476anti-parallel
Strand 3
B
1239 1253anti-parallel
Strand 4
B
1392 1396anti-parallel
Strand 5
B
1341 1347parallel
Strand 6
B
1370 1376parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1334 1335first strand
Strand 2
B
1338 1339anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il