Analysis of interatomic Contacts of Structural Units in PDB entry:
1UIY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UIY entry

There is 1 chain in PDB entry 1UIY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1PHE 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1UIY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 41Right-handed alpha
Helix 2
2
A
61 69Right-handed alpha
Helix 3
3
A
72 93Right-handed alpha
Helix 4
4
A
107 115Right-handed alpha
Helix 5
5
A
130 134Right-handed 310
Helix 6
6
A
138 149Right-handed alpha
Helix 7
7
A
150 161Right-handed alpha
Helix 8
8
A
166 172Right-handed alpha
Helix 9
9
A
183 198Right-handed alpha
Helix 10
10
A
199 213Right-handed alpha
Helix 11
11
A
214 216Right-handed 310
Helix 12
12
A
217 232Right-handed alpha
Helix 13
13
A
235 247Right-handed alpha
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There are 2 sheets in PDB entry 1UIY. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
9 14anti-parallel
Strand 3
A
46 51parallel
Strand 4
A
97 101parallel
Strand 5
A
118 122parallel
Strand 6
A
177 179parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 106first strand
Strand 2
A
126 128parallel
Strand 3
A
163 165anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il