Analysis of interatomic Contacts of Structural Units in PDB entry:
1UN8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UN8 entry

There are 2 chains in PDB entry 1UN8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 550
B
 MET 1GLU 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 1UN8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 10Right-handed 310
Helix 2
2
A
11 23Right-handed alpha
Helix 3
3
A
65 68Right-handed 310
Helix 4
4
A
87 99Right-handed alpha
Helix 5
5
A
111 128Right-handed alpha
Helix 6
6
A
154 168Right-handed alpha
Helix 7
7
A
171 185Right-handed alpha
Helix 8
8
A
232 248Right-handed alpha
Helix 9
9
A
265 278Right-handed alpha
Helix 10
10
A
281 283Right-handed 310
Helix 11
11
A
313 320Right-handed alpha
Helix 12
12
A
355 372Right-handed alpha
Helix 13
13
A
372 382Right-handed alpha
Helix 14
14
A
387 405Right-handed alpha
Helix 15
15
A
412 428Right-handed alpha
Helix 16
16
A
429 449Right-handed alpha
Helix 17
17
A
452 469Right-handed alpha
Helix 18
18
A
477 491Right-handed alpha
Helix 19
19
A
494 512Right-handed alpha
Helix 20
20
A
528 532Right-handed 310
Helix 21
21
A
533 548Right-handed alpha
Helix 22
22
B
8 10Right-handed 310
Helix 23
23
B
11 23Right-handed alpha
Helix 24
24
B
65 68Right-handed 310
Helix 25
25
B
87 99Right-handed alpha
Helix 26
26
B
111 128Right-handed alpha
Helix 27
27
B
154 168Right-handed alpha
Helix 28
28
B
171 185Right-handed alpha
Helix 29
29
B
232 248Right-handed alpha
Helix 30
30
B
265 278Right-handed alpha
Helix 31
31
B
281 283Right-handed 310
Helix 32
32
B
313 320Right-handed alpha
Helix 33
33
B
355 372Right-handed alpha
Helix 34
34
B
372 382Right-handed alpha
Helix 35
35
B
387 405Right-handed alpha
Helix 36
36
B
412 428Right-handed alpha
Helix 37
37
B
429 449Right-handed alpha
Helix 38
38
B
452 469Right-handed alpha
Helix 39
39
B
477 491Right-handed alpha
Helix 40
40
B
494 512Right-handed alpha
Helix 41
41
B
528 532Right-handed 310
Helix 42
42
B
533 548Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 1UN8. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 137first strand
Strand 2
A
104 109parallel
Strand 3
A
52 59parallel
Strand 4
A
76 82parallel
Strand 5
A
40 43anti-parallel
Strand 6
A
29 32anti-parallel
Strand 7
B
338 339parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
213 215anti-parallel
Strand 3
A
186 194anti-parallel
Strand 4
A
301 309anti-parallel
Strand 5
A
254 260anti-parallel
Strand 6
A
285 292parallel
Back to list of sheets
Back to top of page

There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 339first strand
Strand 2
B
29 32parallel
Strand 3
B
40 43anti-parallel
Strand 4
B
76 82anti-parallel
Strand 5
B
52 59parallel
Strand 6
B
104 109parallel
Strand 7
B
132 137parallel
Back to list of sheets
Back to top of page

There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
226 228first strand
Strand 2
B
213 215anti-parallel
Strand 3
B
186 194anti-parallel
Strand 4
B
301 309anti-parallel
Strand 5
B
254 260anti-parallel
Strand 6
B
285 292parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il