Analysis of interatomic Contacts of Structural Units in PDB entry:
1UOK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UOK entry

There is 1 chain in PDB entry 1UOK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 558
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1UOK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 8Right-handed alpha
Helix 2
2
A
16 18Right-handed 310
Helix 3
3
A
30 43Right-handed alpha
Helix 4
4
A
73 75Right-handed 310
Helix 5
5
A
78 90Right-handed alpha
Helix 6
6
A
109 114Right-handed alpha
Helix 7
7
A
123 125Right-handed 310
Helix 8
8
A
175 190Right-handed alpha
Helix 9
9
A
201 203Right-handed 310
Helix 10
10
A
224 226Right-handed 310
Helix 11
11
A
233 243Right-handed alpha
Helix 12
12
A
245 247Right-handed 310
Helix 13
13
A
261 268Right-handed alpha
Helix 14
14
A
270 272Right-handed 310
Helix 15
15
A
282 286Right-handed alpha
Helix 16
16
A
301 314Right-handed alpha
Helix 17
17
A
333 337Right-handed alpha
Helix 18
18
A
344 356Right-handed alpha
Helix 19
19
A
368 370Right-handed 310
Helix 20
20
A
380 382Right-handed 310
Helix 21
21
A
386 397Right-handed alpha
Helix 22
22
A
403 413Right-handed alpha
Helix 23
23
A
415 418Right-handed 310
Helix 24
24
A
443 446Right-handed 310
Helix 25
25
A
450 455Right-handed alpha
Helix 26
26
A
460 473Right-handed alpha
Helix 27
27
A
475 479Right-handed alpha
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There are 5 sheets in PDB entry 1UOK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 15first strand
Strand 2
A
47 50parallel
Strand 3
A
93 100parallel
Strand 4
A
195 198parallel
Strand 5
A
250 256parallel
Strand 6
A
277 280parallel
Strand 7
A
320 324parallel
Strand 8
A
361 365parallel
Strand 9
A
9 15parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 131first strand
Strand 2
A
157 160anti-parallel
Strand 3
A
149 152anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 485first strand
Strand 2
A
492 499anti-parallel
Strand 3
A
502 509anti-parallel
Strand 4
A
552 557anti-parallel
Strand 5
A
527 533anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
515 518first strand
Strand 2
A
544 547anti-parallel
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There are 1 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 540first strand
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il