Analysis of interatomic Contacts of Structural Units in PDB entry:
1UOU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UOU entry

There is 1 chain in PDB entry 1UOU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 33PRO 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 1UOU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 45Right-handed alpha
Helix 2
2
A
50 64Right-handed alpha
Helix 3
3
A
67 82Right-handed alpha
Helix 4
4
A
84 97Right-handed alpha
Helix 5
5
A
105 111Right-handed 310
Helix 6
6
A
124 135Right-handed alpha
Helix 7
7
A
153 159Right-handed alpha
Helix 8
8
A
169 181Right-handed alpha
Helix 9
9
A
192 205Right-handed alpha
Helix 10
10
A
210 225Right-handed alpha
Helix 11
11
A
244 262Right-handed alpha
Helix 12
12
A
283 295Right-handed alpha
Helix 13
13
A
299 317Right-handed alpha
Helix 14
14
A
322 336Right-handed alpha
Helix 15
15
A
337 350Right-handed alpha
Helix 16
16
A
353 363Right-handed alpha
Helix 17
17
A
364 372Right-handed alpha
Helix 18
18
A
393 406Right-handed alpha
Helix 19
19
A
448 458Right-handed alpha
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There are 4 sheets in PDB entry 1UOU. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 117first strand
Strand 2
A
229 236parallel
Strand 3
A
266 272parallel
Strand 4
A
475 477anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 143first strand
Strand 2
A
182 185parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 281first strand
Strand 2
A
420 423anti-parallel
Strand 3
A
436 442anti-parallel
Strand 4
A
377 382anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
430 431first strand
Strand 2
A
387 392anti-parallel
Strand 3
A
459 462anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il