Analysis of interatomic Contacts of Structural Units in PDB entry:
1USL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1USL entry

There are 5 chains in PDB entry 1USL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3GLY 159
B
 GLY 3GLY 159
C
 GLY 3PRO 161
D
 SER 2GLY 159
E
 GLY 3GLY 159
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1USL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 28Right-handed alpha
Helix 2
2
A
47 60Right-handed alpha
Helix 3
3
A
71 80Right-handed alpha
Helix 4
4
A
93 101Right-handed alpha
Helix 5
5
A
117 129Right-handed 310
Helix 6
6
A
136 150Right-handed alpha
Helix 7
7
B
12 28Right-handed alpha
Helix 8
8
B
47 60Right-handed alpha
Helix 9
9
B
71 80Right-handed alpha
Helix 10
10
B
93 101Right-handed alpha
Helix 11
11
B
117 129Right-handed 310
Helix 12
12
B
136 150Right-handed alpha
Helix 13
13
C
12 28Right-handed alpha
Helix 14
14
C
47 60Right-handed alpha
Helix 15
15
C
71 80Right-handed alpha
Helix 16
16
C
93 101Right-handed alpha
Helix 17
17
C
117 129Right-handed 310
Helix 18
18
C
136 150Right-handed alpha
Helix 19
19
D
12 28Right-handed alpha
Helix 20
20
D
47 60Right-handed alpha
Helix 21
21
D
71 80Right-handed alpha
Helix 22
22
D
93 101Right-handed alpha
Helix 23
23
D
117 129Right-handed 310
Helix 24
24
D
136 150Right-handed alpha
Helix 25
25
E
12 28Right-handed alpha
Helix 26
26
E
47 60Right-handed alpha
Helix 27
27
E
71 80Right-handed alpha
Helix 28
28
E
93 101Right-handed alpha
Helix 29
29
E
117 129Right-handed 310
Helix 30
30
E
136 150Right-handed alpha
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There are 5 sheets in PDB entry 1USL. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
5 11parallel
Strand 3
A
63 69parallel
Strand 4
A
107 112parallel
Strand 5
A
85 90parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 35first strand
Strand 2
B
5 11parallel
Strand 3
B
63 69parallel
Strand 4
B
107 112parallel
Strand 5
B
85 90parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 35first strand
Strand 2
C
5 11parallel
Strand 3
C
63 69parallel
Strand 4
C
107 112parallel
Strand 5
C
85 90parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 35first strand
Strand 2
D
5 11parallel
Strand 3
D
63 69parallel
Strand 4
D
107 112parallel
Strand 5
D
85 90parallel
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There are 5 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
30 35first strand
Strand 2
E
5 11parallel
Strand 3
E
63 69parallel
Strand 4
E
107 112parallel
Strand 5
E
85 90parallel
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