Analysis of interatomic Contacts of Structural Units in PDB entry:
1UT2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UT2 entry

There are 9 chains in PDB entry 1UT2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ALA 138
B
 GLY 0ALA 138
C
 GLY 0ALA 138
D
 GLY 0ALA 138
E
 GLY 0ALA 138
F
 GLY 0ALA 138
G
 GLY 0ALA 138
H
 GLY 0LYS 139
I
 GLY 0ALA 138
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1UT2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 35Right-handed 310
Helix 2
2
A
62 64Right-handed 310
Helix 3
3
B
33 35Right-handed 310
Helix 4
4
B
62 64Right-handed 310
Helix 5
5
C
33 35Right-handed 310
Helix 6
6
C
62 64Right-handed 310
Helix 7
7
D
33 35Right-handed 310
Helix 8
8
D
62 64Right-handed 310
Helix 9
9
E
33 35Right-handed 310
Helix 10
10
E
62 64Right-handed 310
Helix 11
11
F
33 35Right-handed 310
Helix 12
12
F
62 64Right-handed 310
Helix 13
13
G
33 35Right-handed 310
Helix 14
14
G
62 64Right-handed 310
Helix 15
15
H
62 64Right-handed 310
Helix 16
16
I
33 35Right-handed 310
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There are 12 sheets in PDB entry 1UT2. Click on sheet of interest to get list of strands forming it: AA, AB, CA, CB, BA, BB, A, EA, IA, FA, GA, HA,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 31first strand
Strand 2
A
1 16parallel
Strand 3
A
126 138anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 31first strand
Strand 2
A
1 16parallel
Strand 3
B
20 23parallel
Strand 4
A
40 49anti-parallel
Strand 5
A
109 116anti-parallel
Strand 6
A
80 87anti-parallel
Strand 7
A
70 74anti-parallel
Strand 8
A
126 138anti-parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 31first strand
Strand 2
C
1 16parallel
Strand 3
A
20 23parallel
Strand 4
C
40 49anti-parallel
Strand 5
C
109 116anti-parallel
Strand 6
C
80 87anti-parallel
Strand 7
C
70 74anti-parallel
Strand 8
C
126 138anti-parallel
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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 31first strand
Strand 2
C
1 16parallel
Strand 3
C
126 138anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 31first strand
Strand 2
B
1 16parallel
Strand 3
B
126 138anti-parallel
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There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 31first strand
Strand 2
B
1 16parallel
Strand 3
C
20 22parallel
Strand 4
B
40 49anti-parallel
Strand 5
B
109 116anti-parallel
Strand 6
B
80 87anti-parallel
Strand 7
B
70 74anti-parallel
Strand 8
B
126 138anti-parallel
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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 31first strand
Strand 2
D
1 16parallel
Strand 3
D
93 96first strand
Strand 4
D
99 105anti-parallel
Strand 5
D
55 60anti-parallel
Strand 6
D
126 138anti-parallel
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There are 6 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
28 31first strand
Strand 2
E
2 16parallel
Strand 3
E
93 96first strand
Strand 4
E
99 102anti-parallel
Strand 5
E
55 60anti-parallel
Strand 6
E
126 137anti-parallel
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There are 8 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
28 31first strand
Strand 2
I
2 16parallel
Strand 3
I
65 66first strand
Strand 4
I
69 74anti-parallel
Strand 5
I
93 96first strand
Strand 6
I
99 102anti-parallel
Strand 7
I
55 60anti-parallel
Strand 8
I
126 137anti-parallel
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There are 6 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
29 31first strand
Strand 2
F
2 16parallel
Strand 3
F
93 96first strand
Strand 4
F
99 102anti-parallel
Strand 5
F
55 60anti-parallel
Strand 6
F
126 137anti-parallel
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There are 6 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
28 31first strand
Strand 2
G
1 16parallel
Strand 3
G
93 96first strand
Strand 4
G
99 102anti-parallel
Strand 5
G
55 60anti-parallel
Strand 6
G
126 138anti-parallel
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There are 6 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
28 31first strand
Strand 2
H
2 16parallel
Strand 3
H
93 96first strand
Strand 4
H
99 102anti-parallel
Strand 5
H
55 60anti-parallel
Strand 6
H
126 137anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il