Analysis of interatomic Contacts of Structural Units in PDB entry:
1UU2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UU2 entry

There are 2 chains in PDB entry 1UU2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 14LYS 335
B
 GLU 17LYS 335
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1UU2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 42Right-handed alpha
Helix 2
2
A
46 51Right-handed alpha
Helix 3
3
A
60 70Right-handed alpha
Helix 4
4
A
83 96Right-handed alpha
Helix 5
5
A
107 117Right-handed alpha
Helix 6
6
A
156 165Right-handed alpha
Helix 7
7
A
176 180Right-handed 310
Helix 8
8
A
206 210Right-handed 310
Helix 9
9
A
217 228Right-handed alpha
Helix 10
10
A
234 246Right-handed alpha
Helix 11
11
A
247 272Right-handed alpha
Helix 12
12
A
289 291Right-handed 310
Helix 13
13
A
292 301Right-handed alpha
Helix 14
14
A
320 333Right-handed alpha
Helix 15
15
B
34 43Right-handed alpha
Helix 16
16
B
58 70Right-handed alpha
Helix 17
17
B
75 77Right-handed 310
Helix 18
18
B
83 93Right-handed alpha
Helix 19
19
B
94 96Right-handed 310
Helix 20
20
B
106 117Right-handed alpha
Helix 21
21
B
156 165Right-handed alpha
Helix 22
22
B
184 190Right-handed 310
Helix 23
23
B
217 226Right-handed alpha
Helix 24
24
B
234 246Right-handed alpha
Helix 25
25
B
247 272Right-handed alpha
Helix 26
26
B
292 302Right-handed alpha
Helix 27
27
B
320 333Right-handed alpha
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There are 4 sheets in PDB entry 1UU2. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
305 309parallel
Strand 3
A
313 317anti-parallel
Strand 4
A
283 287anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 82first strand
Strand 2
A
212 216anti-parallel
Strand 3
A
194 199anti-parallel
Strand 4
A
169 173parallel
Strand 5
A
140 143parallel
Strand 6
A
98 101parallel
Strand 7
A
119 122parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 82first strand
Strand 2
B
212 216anti-parallel
Strand 3
B
194 199anti-parallel
Strand 4
B
169 173parallel
Strand 5
B
140 145parallel
Strand 6
B
98 101parallel
Strand 7
B
119 122parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
283 287first strand
Strand 2
B
313 317anti-parallel
Strand 3
B
308 309anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il