Analysis of interatomic Contacts of Structural Units in PDB entry:
1UUK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UUK entry

There is 1 chain in PDB entry 1UUK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 TYR 71LEU 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1UUK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
78 81Right-handed alpha
Helix 2
2
C
86 98Right-handed alpha
Helix 3
3
C
111 118Right-handed alpha
Helix 4
4
C
126 140Right-handed alpha
Helix 5
5
C
181 186Right-handed alpha
Helix 6
6
C
196 201Right-handed alpha
Helix 7
7
C
204 218Right-handed alpha
Helix 8
8
C
226 235Right-handed alpha
Helix 9
9
C
246 258Right-handed alpha
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There are 5 sheets in PDB entry 1UUK. Click on sheet of interest to get list of strands forming it: CA, CB, CC, CD, CE,

There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
73 74first strand
Strand 2
C
194 195anti-parallel
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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
106 110first strand
Strand 2
C
173 178anti-parallel
Strand 3
C
162 167anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
144 147first strand
Strand 2
C
157 160anti-parallel
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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
261 262first strand
Strand 2
C
277 278anti-parallel
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There are 1 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
222 225first strand
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il