Analysis of interatomic Contacts of Structural Units in PDB entry:
1UV6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1UV6 entry

There are 10 chains in PDB entry 1UV6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 1	GLY 205
B	LEU 1	GLY 205
C	LEU 1	GLY 205
D	LEU 1	GLY 205
E	LEU 1	GLY 205
F	LEU 1	GLY 205
G	LEU 1	GLY 205
H	LEU 1	GLY 205
I	LEU 1	GLY 205
J	LEU 1	GLY 205

There are 32 helices in PDB entry 1UV6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	2	14	Right-handed alpha
Helix 2	2	A	61	64	Right-handed 310
Helix 3	3	A	79	81	Right-handed 310
Helix 4	4	B	2	14	Right-handed alpha
Helix 5	5	B	61	64	Right-handed 310
Helix 6	6	B	79	81	Right-handed 310
Helix 7	7	C	2	14	Right-handed alpha
Helix 8	8	C	61	64	Right-handed 310
Helix 9	9	C	79	81	Right-handed 310
Helix 10	10	D	2	14	Right-handed alpha
Helix 11	11	D	61	64	Right-handed 310
Helix 12	12	D	79	81	Right-handed 310
Helix 13	13	E	2	14	Right-handed alpha
Helix 14	14	E	61	64	Right-handed 310
Helix 15	15	E	79	81	Right-handed 310
Helix 16	16	E	160	164	Right-handed 310
Helix 17	17	F	2	14	Right-handed alpha
Helix 18	18	F	61	64	Right-handed 310
Helix 19	19	F	79	81	Right-handed 310
Helix 20	20	G	2	14	Right-handed alpha
Helix 21	21	G	61	64	Right-handed 310
Helix 22	22	G	79	81	Right-handed 310
Helix 23	23	G	160	164	Right-handed 310
Helix 24	24	H	2	14	Right-handed alpha
Helix 25	25	H	61	64	Right-handed 310
Helix 26	26	H	79	81	Right-handed 310
Helix 27	27	I	2	14	Right-handed alpha
Helix 28	28	I	61	64	Right-handed 310
Helix 29	29	I	79	81	Right-handed 310
Helix 30	30	J	2	14	Right-handed alpha
Helix 31	31	J	61	64	Right-handed 310
Helix 32	32	J	79	81	Right-handed 310

There are 23 sheets in PDB entry 1UV6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, DA, DB, EA, EB, FA, FB, GA, GB, HA, HB, IA, IB, JA, JB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	77	first strand
Strand 2	A	102	106	anti-parallel
Strand 3	A	110	113	anti-parallel
Strand 4	A	47	59	anti-parallel
Strand 5	A	27	42	anti-parallel
Strand 6	A	150	154	parallel

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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	77	first strand
Strand 2	A	102	106	anti-parallel
Strand 3	A	110	113	anti-parallel
Strand 4	A	47	59	anti-parallel
Strand 5	A	116	122	anti-parallel
Strand 6	A	96	97	anti-parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	88	first strand
Strand 2	A	134	142	anti-parallel
Strand 3	A	192	203	anti-parallel
Strand 4	A	171	183	anti-parallel

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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	77	first strand
Strand 2	B	102	106	anti-parallel
Strand 3	B	110	113	anti-parallel
Strand 4	B	47	59	anti-parallel
Strand 5	B	27	42	anti-parallel
Strand 6	B	150	154	parallel

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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	77	first strand
Strand 2	B	102	106	anti-parallel
Strand 3	B	110	113	anti-parallel
Strand 4	B	47	59	anti-parallel
Strand 5	B	116	122	anti-parallel
Strand 6	B	96	97	anti-parallel

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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	88	first strand
Strand 2	B	134	142	anti-parallel
Strand 3	B	192	203	anti-parallel
Strand 4	B	171	183	anti-parallel

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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	77	first strand
Strand 2	C	102	106	anti-parallel
Strand 3	C	110	113	anti-parallel
Strand 4	C	47	59	anti-parallel
Strand 5	C	27	42	anti-parallel
Strand 6	C	150	153	parallel

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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	77	first strand
Strand 2	C	102	106	anti-parallel
Strand 3	C	110	113	anti-parallel
Strand 4	C	47	59	anti-parallel
Strand 5	C	116	122	anti-parallel
Strand 6	C	96	97	anti-parallel

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There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	86	88	first strand
Strand 2	C	134	142	anti-parallel
Strand 3	C	192	203	anti-parallel
Strand 4	C	171	183	anti-parallel

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There are 10 strands in DA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	77	first strand
Strand 2	D	102	106	anti-parallel
Strand 3	D	110	113	anti-parallel
Strand 4	D	47	59	anti-parallel
Strand 5	D	96	97	first strand
Strand 6	D	116	122	anti-parallel
Strand 7	D	47	59	anti-parallel
Strand 8	D	150	153	first strand
Strand 9	D	27	42	parallel
Strand 10	D	47	59	anti-parallel

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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	86	88	first strand
Strand 2	D	134	142	anti-parallel
Strand 3	D	191	203	anti-parallel
Strand 4	D	171	184	anti-parallel

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There are 10 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	73	77	first strand
Strand 2	E	102	106	anti-parallel
Strand 3	E	110	113	anti-parallel
Strand 4	E	47	59	anti-parallel
Strand 5	E	96	97	first strand
Strand 6	E	116	122	anti-parallel
Strand 7	E	47	59	anti-parallel
Strand 8	E	150	153	first strand
Strand 9	E	27	42	parallel
Strand 10	E	47	59	anti-parallel

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There are 4 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	86	88	first strand
Strand 2	E	134	142	anti-parallel
Strand 3	E	191	203	anti-parallel
Strand 4	E	171	184	anti-parallel

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There are 10 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	73	77	first strand
Strand 2	F	102	106	anti-parallel
Strand 3	F	110	113	anti-parallel
Strand 4	F	47	59	anti-parallel
Strand 5	F	96	97	first strand
Strand 6	F	116	122	anti-parallel
Strand 7	F	47	59	anti-parallel
Strand 8	F	150	154	first strand
Strand 9	F	27	42	parallel
Strand 10	F	47	59	anti-parallel

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There are 4 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	86	88	first strand
Strand 2	F	134	142	anti-parallel
Strand 3	F	191	203	anti-parallel
Strand 4	F	171	184	anti-parallel

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There are 10 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	73	77	first strand
Strand 2	G	102	106	anti-parallel
Strand 3	G	110	113	anti-parallel
Strand 4	G	47	59	anti-parallel
Strand 5	G	96	97	first strand
Strand 6	G	116	122	anti-parallel
Strand 7	G	47	59	anti-parallel
Strand 8	G	150	153	first strand
Strand 9	G	27	42	parallel
Strand 10	G	47	59	anti-parallel

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There are 4 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	86	88	first strand
Strand 2	G	134	142	anti-parallel
Strand 3	G	191	203	anti-parallel
Strand 4	G	171	184	anti-parallel

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There are 10 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	73	77	first strand
Strand 2	H	102	106	anti-parallel
Strand 3	H	110	113	anti-parallel
Strand 4	H	47	59	anti-parallel
Strand 5	H	96	97	first strand
Strand 6	H	116	122	anti-parallel
Strand 7	H	47	59	anti-parallel
Strand 8	H	150	154	first strand
Strand 9	H	27	42	parallel
Strand 10	H	47	59	anti-parallel

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There are 4 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	86	88	first strand
Strand 2	H	134	142	anti-parallel
Strand 3	H	192	203	anti-parallel
Strand 4	H	171	183	anti-parallel

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There are 10 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	73	77	first strand
Strand 2	I	102	106	anti-parallel
Strand 3	I	110	113	anti-parallel
Strand 4	I	47	59	anti-parallel
Strand 5	I	96	97	first strand
Strand 6	I	116	122	anti-parallel
Strand 7	I	47	59	anti-parallel
Strand 8	I	150	154	first strand
Strand 9	I	27	42	parallel
Strand 10	I	47	59	anti-parallel

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There are 4 strands in IB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	86	88	first strand
Strand 2	I	134	142	anti-parallel
Strand 3	I	192	203	anti-parallel
Strand 4	I	171	183	anti-parallel

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There are 10 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	73	77	first strand
Strand 2	J	102	106	anti-parallel
Strand 3	J	110	113	anti-parallel
Strand 4	J	47	59	anti-parallel
Strand 5	J	96	97	first strand
Strand 6	J	116	122	anti-parallel
Strand 7	J	47	59	anti-parallel
Strand 8	J	150	153	first strand
Strand 9	J	27	42	parallel
Strand 10	J	47	59	anti-parallel

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There are 4 strands in JB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	86	88	first strand
Strand 2	J	134	142	anti-parallel
Strand 3	J	191	203	anti-parallel
Strand 4	J	171	184	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1UV6

Analysis of interatomic Contacts of Structural Units in PDB entry:
1UV6