Analysis of interatomic Contacts of Structural Units in PDB entry:
1UV9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UV9 entry

There is 1 chain in PDB entry 1UV9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1LEU 942
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 1UV9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
199 207Right-handed alpha
Helix 2
2
A
355 358Right-handed 310
Helix 3
3
A
382 386Right-handed 310
Helix 4
4
A
772 777Right-handed alpha
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There are 18 sheets in PDB entry 1UV9. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 12first strand
Strand 2
A
444 448anti-parallel
Strand 3
A
435 439anti-parallel
Strand 4
A
421 423anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
34 39anti-parallel
Strand 3
A
52 57anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
83 84anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 99first strand
Strand 2
A
104 108anti-parallel
Strand 3
A
129 131anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 114first strand
Strand 2
A
125 126anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 174first strand
Strand 2
A
182 185anti-parallel
Strand 3
A
194 197anti-parallel
Strand 4
A
222 223anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 241first strand
Strand 2
A
253 257anti-parallel
Strand 3
A
266 270anti-parallel
Strand 4
A
276 281anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 295first strand
Strand 2
A
306 310anti-parallel
Strand 3
A
327 331anti-parallel
Strand 4
A
344 348anti-parallel
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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 362first strand
Strand 2
A
374 378anti-parallel
Strand 3
A
388 392anti-parallel
Strand 4
A
405 408anti-parallel
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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 395first strand
Strand 2
A
398 399anti-parallel
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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 494first strand
Strand 2
A
453 457anti-parallel
Strand 3
A
583 584parallel
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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
460 462first strand
Strand 2
A
484 489anti-parallel
Strand 3
A
546 552anti-parallel
Strand 4
A
521 523anti-parallel
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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 537first strand
Strand 2
A
502 510anti-parallel
Strand 3
A
565 572anti-parallel
Strand 4
A
595 596anti-parallel
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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
612 615first strand
Strand 2
A
629 639anti-parallel
Strand 3
A
697 707anti-parallel
Strand 4
A
659 662anti-parallel
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There are 6 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
623 624first strand
Strand 2
A
736 743parallel
Strand 3
A
716 724anti-parallel
Strand 4
A
648 652anti-parallel
Strand 5
A
683 688anti-parallel
Strand 6
A
673 678anti-parallel
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There are 4 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
748 754first strand
Strand 2
A
779 788anti-parallel
Strand 3
A
899 908anti-parallel
Strand 4
A
814 821anti-parallel
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There are 4 strands in AQ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
824 828first strand
Strand 2
A
886 895anti-parallel
Strand 3
A
794 803anti-parallel
Strand 4
A
927 934anti-parallel
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There are 2 strands in AR sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
805 806first strand
Strand 2
A
811 812anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il