Analysis of interatomic Contacts of Structural Units in PDB entry:
1UVK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UVK entry

There are 3 chains in PDB entry 1UVK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1ARG 664
C
 PRO 1ARG 664
E
 PRO 1ARG 664
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 1UVK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 16Right-handed alpha
Helix 2
AA2
A
21 30Right-handed alpha
Helix 3
AA3
A
47 65Right-handed alpha
Helix 4
AA4
A
84 87Right-handed 310
Helix 5
AA5
A
105 112Right-handed alpha
Helix 6
AA6
A
120 136Right-handed alpha
Helix 7
AA7
A
159 183Right-handed alpha
Helix 8
AA8
A
185 194Right-handed alpha
Helix 9
AA9
A
229 235Right-handed alpha
Helix 10
AB1
A
250 257Right-handed alpha
Helix 11
AB2
A
276 297Right-handed alpha
Helix 12
AB3
A
298 303Right-handed alpha
Helix 13
AB4
A
306 316Right-handed alpha
Helix 14
AB5
A
327 332Right-handed alpha
Helix 15
AB6
A
333 348Right-handed alpha
Helix 16
AB7
A
350 361Right-handed alpha
Helix 17
AB8
A
397 419Right-handed alpha
Helix 18
AB9
A
420 426Right-handed 310
Helix 19
AC1
A
428 441Right-handed alpha
Helix 20
AC2
A
462 478Right-handed alpha
Helix 21
AC3
A
508 512Right-handed 310
Helix 22
AC4
A
517 527Right-handed alpha
Helix 23
AC5
A
538 542Right-handed 310
Helix 24
AC6
A
546 548Right-handed 310
Helix 25
AC7
A
549 559Right-handed alpha
Helix 26
AC8
A
563 580Right-handed alpha
Helix 27
AC9
A
582 600Right-handed alpha
Helix 28
AD1
A
615 624Right-handed alpha
Helix 29
AD2
A
625 629Right-handed 310
Helix 30
AD3
A
633 637Right-handed 310
Helix 31
AD4
A
638 645Right-handed alpha
Helix 32
AD5
A
650 662Right-handed alpha
Helix 33
AD6
C
11 16Right-handed alpha
Helix 34
AD7
C
21 30Right-handed alpha
Helix 35
AD8
C
47 65Right-handed alpha
Helix 36
AD9
C
84 87Right-handed 310
Helix 37
AE1
C
105 112Right-handed alpha
Helix 38
AE2
C
120 136Right-handed alpha
Helix 39
AE3
C
159 183Right-handed alpha
Helix 40
AE4
C
185 194Right-handed alpha
Helix 41
AE5
C
229 235Right-handed alpha
Helix 42
AE6
C
250 257Right-handed alpha
Helix 43
AE7
C
276 297Right-handed alpha
Helix 44
AE8
C
298 303Right-handed alpha
Helix 45
AE9
C
306 316Right-handed alpha
Helix 46
AF1
C
327 332Right-handed alpha
Helix 47
AF2
C
333 348Right-handed alpha
Helix 48
AF3
C
350 361Right-handed alpha
Helix 49
AF4
C
397 419Right-handed alpha
Helix 50
AF5
C
420 426Right-handed 310
Helix 51
AF6
C
428 441Right-handed alpha
Helix 52
AF7
C
462 478Right-handed alpha
Helix 53
AF8
C
508 512Right-handed 310
Helix 54
AF9
C
517 527Right-handed alpha
Helix 55
AG1
C
538 542Right-handed 310
Helix 56
AG2
C
546 548Right-handed 310
Helix 57
AG3
C
549 559Right-handed alpha
Helix 58
AG4
C
563 580Right-handed alpha
Helix 59
AG5
C
582 600Right-handed alpha
Helix 60
AG6
C
615 624Right-handed alpha
Helix 61
AG7
C
625 629Right-handed 310
Helix 62
AG8
C
633 637Right-handed 310
Helix 63
AG9
C
638 645Right-handed alpha
Helix 64
AH1
C
650 662Right-handed alpha
Helix 65
AH2
E
11 16Right-handed alpha
Helix 66
AH3
E
21 30Right-handed alpha
Helix 67
AH4
E
47 65Right-handed alpha
Helix 68
AH5
E
84 87Right-handed 310
Helix 69
AH6
E
105 112Right-handed alpha
Helix 70
AH7
E
120 136Right-handed alpha
Helix 71
AH8
E
159 183Right-handed alpha
Helix 72
AH9
E
185 194Right-handed alpha
Helix 73
AI1
E
229 235Right-handed alpha
Helix 74
AI2
E
250 257Right-handed alpha
Helix 75
AI3
E
276 297Right-handed alpha
Helix 76
AI4
E
298 303Right-handed alpha
Helix 77
AI5
E
306 316Right-handed alpha
Helix 78
AI6
E
327 332Right-handed alpha
Helix 79
AI7
E
333 348Right-handed alpha
Helix 80
AI8
E
350 361Right-handed alpha
Helix 81
AI9
E
397 419Right-handed alpha
Helix 82
AJ1
E
420 426Right-handed 310
Helix 83
AJ2
E
428 441Right-handed alpha
Helix 84
AJ3
E
462 478Right-handed alpha
Helix 85
AJ4
E
508 512Right-handed 310
Helix 86
AJ5
E
517 527Right-handed alpha
Helix 87
AJ6
E
538 542Right-handed 310
Helix 88
AJ7
E
546 548Right-handed 310
Helix 89
AJ8
E
549 559Right-handed alpha
Helix 90
AJ9
E
563 580Right-handed alpha
Helix 91
AK1
E
582 600Right-handed alpha
Helix 92
AK2
E
615 624Right-handed alpha
Helix 93
AK3
E
625 629Right-handed 310
Helix 94
AK4
E
633 637Right-handed 310
Helix 95
AK5
E
638 645Right-handed alpha
Helix 96
AK6
E
650 662Right-handed alpha
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There are 21 sheets in PDB entry 1UVK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
377 379anti-parallel
Strand 3
A
365 367anti-parallel
Strand 4
A
199 206parallel
Strand 5
A
265 274anti-parallel
Strand 6
A
89 94parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
43 44anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
646 648anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 214first strand
Strand 2
A
219 222anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
242 244anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 451first strand
Strand 2
A
454 459anti-parallel
Strand 3
A
319 325anti-parallel
Strand 4
A
488 490anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
495 496first strand
Strand 2
A
499 502anti-parallel
Strand 3
A
513 515anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 8first strand
Strand 2
C
377 379anti-parallel
Strand 3
C
365 367anti-parallel
Strand 4
C
199 206parallel
Strand 5
C
265 274anti-parallel
Strand 6
C
89 94parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 40first strand
Strand 2
C
43 44anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
144 146first strand
Strand 2
C
646 648anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
211 214first strand
Strand 2
C
219 222anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
226 228first strand
Strand 2
C
242 244anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
446 451first strand
Strand 2
C
454 459anti-parallel
Strand 3
C
319 325anti-parallel
Strand 4
C
488 490anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
495 496first strand
Strand 2
C
499 502anti-parallel
Strand 3
C
513 515anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
6 8first strand
Strand 2
E
377 379anti-parallel
Strand 3
E
365 367anti-parallel
Strand 4
E
199 206parallel
Strand 5
E
265 274anti-parallel
Strand 6
E
89 94parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
38 40first strand
Strand 2
E
43 44anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
144 146first strand
Strand 2
E
646 648anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
211 214first strand
Strand 2
E
219 222anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
226 228first strand
Strand 2
E
242 244anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
446 451first strand
Strand 2
E
454 459anti-parallel
Strand 3
E
319 325anti-parallel
Strand 4
E
488 490anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
495 496first strand
Strand 2
E
499 502anti-parallel
Strand 3
E
513 515anti-parallel
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