Analysis of interatomic Contacts of Structural Units in PDB entry:
1UW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UW5 entry

There are 4 chains in PDB entry 1UW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ASP 269
B
 MSE 1ASP 269
C
 MSE 1ASP 269
D
 MSE 1ALA 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 1UW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 34Right-handed alpha
Helix 2
2
A
69 74Right-handed alpha
Helix 3
3
A
100 104Right-handed 310
Helix 4
4
A
129 134Right-handed alpha
Helix 5
5
A
145 149Right-handed 310
Helix 6
6
A
150 154Right-handed 310
Helix 7
7
A
155 159Right-handed 310
Helix 8
8
A
159 163Right-handed 310
Helix 9
9
A
176 183Right-handed alpha
Helix 10
10
A
205 231Right-handed alpha
Helix 11
11
A
231 236Right-handed alpha
Helix 12
12
A
239 261Right-handed alpha
Helix 13
13
B
14 34Right-handed alpha
Helix 14
14
B
69 74Right-handed alpha
Helix 15
15
B
129 134Right-handed alpha
Helix 16
16
B
145 149Right-handed 310
Helix 17
17
B
150 154Right-handed 310
Helix 18
18
B
155 159Right-handed 310
Helix 19
19
B
159 163Right-handed 310
Helix 20
20
B
176 183Right-handed alpha
Helix 21
21
B
205 231Right-handed alpha
Helix 22
22
B
231 236Right-handed alpha
Helix 23
23
B
239 261Right-handed alpha
Helix 24
24
C
14 34Right-handed alpha
Helix 25
25
C
69 74Right-handed alpha
Helix 26
26
C
100 105Right-handed 310
Helix 27
27
C
129 134Right-handed alpha
Helix 28
28
C
145 149Right-handed 310
Helix 29
29
C
150 154Right-handed 310
Helix 30
30
C
155 159Right-handed 310
Helix 31
31
C
159 163Right-handed 310
Helix 32
32
C
176 184Right-handed alpha
Helix 33
33
C
205 231Right-handed alpha
Helix 34
34
C
231 236Right-handed alpha
Helix 35
35
C
239 261Right-handed alpha
Helix 36
36
D
14 34Right-handed alpha
Helix 37
37
D
69 74Right-handed alpha
Helix 38
38
D
129 134Right-handed alpha
Helix 39
39
D
145 149Right-handed 310
Helix 40
40
D
150 154Right-handed 310
Helix 41
41
D
155 159Right-handed 310
Helix 42
42
D
159 163Right-handed 310
Helix 43
43
D
176 184Right-handed alpha
Helix 44
44
D
205 231Right-handed alpha
Helix 45
45
D
231 236Right-handed alpha
Helix 46
46
D
239 261Right-handed alpha
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There are 4 sheets in PDB entry 1UW5. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 49first strand
Strand 2
A
54 64anti-parallel
Strand 3
A
81 90anti-parallel
Strand 4
A
93 99anti-parallel
Strand 5
A
107 116anti-parallel
Strand 6
A
190 200anti-parallel
Strand 7
A
3 11anti-parallel
Strand 8
A
137 141parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 49first strand
Strand 2
B
54 64anti-parallel
Strand 3
B
81 90anti-parallel
Strand 4
B
93 99anti-parallel
Strand 5
B
107 116anti-parallel
Strand 6
B
190 200anti-parallel
Strand 7
B
3 11anti-parallel
Strand 8
B
137 141parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
39 49first strand
Strand 2
C
54 64anti-parallel
Strand 3
C
81 90anti-parallel
Strand 4
C
93 99anti-parallel
Strand 5
C
107 116anti-parallel
Strand 6
C
190 200anti-parallel
Strand 7
C
3 11anti-parallel
Strand 8
C
137 141parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 49first strand
Strand 2
D
54 64anti-parallel
Strand 3
D
81 90anti-parallel
Strand 4
D
93 99anti-parallel
Strand 5
D
107 116anti-parallel
Strand 6
D
190 200anti-parallel
Strand 7
D
3 11anti-parallel
Strand 8
D
137 141parallel
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