Analysis of interatomic Contacts of Structural Units in PDB entry:
1UWX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UWX entry

There are 8 chains in PDB entry 1UWX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 5LYS 62
B
 VAL 5GLU 64
H
 VAL 2PRO 215
K
 GLY 3ASN 213
L
 GLY 3ASN 213
M
 VAL 2PRO 215
P
 HIS 1LEU 13
Q
 HIS 1LEU 13
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1UWX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 42Right-handed alpha
Helix 2
2
B
27 42Right-handed alpha
Helix 3
3
H
28 32Right-handed 310
Helix 4
4
H
61 64Right-handed 310
Helix 5
5
H
73 75Right-handed 310
Helix 6
6
H
83 87Right-handed 310
Helix 7
7
H
156 158Right-handed 310
Helix 8
8
H
200 203Right-handed 310
Helix 9
9
K
81 85Right-handed 310
Helix 10
10
K
122 128Right-handed alpha
Helix 11
11
K
184 188Right-handed alpha
Helix 12
12
L
81 85Right-handed 310
Helix 13
13
L
122 128Right-handed alpha
Helix 14
14
L
184 188Right-handed alpha
Helix 15
15
M
28 32Right-handed 310
Helix 16
16
M
61 64Right-handed 310
Helix 17
17
M
73 75Right-handed 310
Helix 18
18
M
83 87Right-handed 310
Helix 19
19
M
156 158Right-handed 310
Helix 20
20
M
200 203Right-handed 310
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There are 19 sheets in PDB entry 1UWX. Click on sheet of interest to get list of strands forming it: AA, BA, HA, HB, HC, HD, HE, KA, KB, KC, KD, LA, LB, LC, LD, MA, MB, MC, MD,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 51first strand
Strand 2
A
56 60anti-parallel
Strand 3
A
6 13parallel
Strand 4
A
17 25anti-parallel
Strand 5
H
204 209anti-parallel
Strand 6
H
194 199anti-parallel
Strand 7
H
151 154anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 51first strand
Strand 2
B
56 60anti-parallel
Strand 3
B
6 13parallel
Strand 4
B
17 25anti-parallel
Strand 5
M
204 209anti-parallel
Strand 6
M
194 199anti-parallel
Strand 7
M
151 154anti-parallel
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There are 4 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
77 82anti-parallel
Strand 4
H
67 72anti-parallel
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There are 6 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
107 111parallel
Strand 3
H
88 96anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
57 59anti-parallel
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There are 4 strands in HC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
107 111parallel
Strand 3
H
88 96anti-parallel
Strand 4
H
100 103anti-parallel
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There are 4 strands in HD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
120 124first strand
Strand 2
H
135 145anti-parallel
Strand 3
H
175 184anti-parallel
Strand 4
H
163 165anti-parallel
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There are 4 strands in HE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
120 124first strand
Strand 2
H
135 145anti-parallel
Strand 3
H
175 184anti-parallel
Strand 4
H
169 170anti-parallel
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There are 4 strands in KA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
6 7first strand
Strand 2
K
21 27anti-parallel
Strand 3
K
72 77anti-parallel
Strand 4
K
64 69anti-parallel
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There are 6 strands in KB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
12 15first strand
Strand 2
K
104 107parallel
Strand 3
K
87 92anti-parallel
Strand 4
K
35 40anti-parallel
Strand 5
K
47 51anti-parallel
Strand 6
K
55 56anti-parallel
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There are 4 strands in KC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
115 119first strand
Strand 2
K
130 140anti-parallel
Strand 3
K
174 183anti-parallel
Strand 4
K
160 164anti-parallel
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There are 4 strands in KD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
154 156first strand
Strand 2
K
146 151anti-parallel
Strand 3
K
192 198anti-parallel
Strand 4
K
206 211anti-parallel
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There are 4 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
6 7first strand
Strand 2
L
21 27anti-parallel
Strand 3
L
72 77anti-parallel
Strand 4
L
64 69anti-parallel
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There are 6 strands in LB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
12 15first strand
Strand 2
L
104 107parallel
Strand 3
L
87 92anti-parallel
Strand 4
L
35 40anti-parallel
Strand 5
L
47 51anti-parallel
Strand 6
L
55 56anti-parallel
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There are 4 strands in LC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
115 119first strand
Strand 2
L
130 140anti-parallel
Strand 3
L
174 183anti-parallel
Strand 4
L
160 164anti-parallel
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There are 4 strands in LD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
154 156first strand
Strand 2
L
146 151anti-parallel
Strand 3
L
192 198anti-parallel
Strand 4
L
206 211anti-parallel
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There are 4 strands in MA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
3 6first strand
Strand 2
M
18 25anti-parallel
Strand 3
M
77 82anti-parallel
Strand 4
M
67 72anti-parallel
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There are 6 strands in MB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
10 12first strand
Strand 2
M
107 111parallel
Strand 3
M
88 96anti-parallel
Strand 4
M
33 39anti-parallel
Strand 5
M
46 51anti-parallel
Strand 6
M
57 59anti-parallel
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There are 4 strands in MC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
10 12first strand
Strand 2
M
107 111parallel
Strand 3
M
88 96anti-parallel
Strand 4
M
100 103anti-parallel
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There are 7 strands in MD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
120 124first strand
Strand 2
M
135 145anti-parallel
Strand 3
M
175 184anti-parallel
Strand 4
M
163 165anti-parallel
Strand 5
M
175 184anti-parallel
Strand 6
M
169 170anti-parallel
Strand 7
M
175 184anti-parallel
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